RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 M0R2C6 588 aa21.99■■□□□ 1.11
RFFL-211ENST00000584541 MBD4O95243 580 aa21.99■■□□□ 1.11
RFFL-211ENST00000584541 PPP4CP60510 307 aa21.99■■□□□ 1.11
RFFL-211ENST00000584541 ESYT1Q9BSJ8 1104 aa21.99■■□□□ 1.11
RFFL-211ENST00000584541 HACL1Q9UJ83 578 aa21.99■■□□□ 1.11
RFFL-211ENST00000584541 CDK5RAP2Q96SN8 1893 aa21.98■■□□□ 1.11
RFFL-211ENST00000584541 SHTN1A0MZ66 631 aa21.98■■□□□ 1.11
RFFL-211ENST00000584541 GPAA1O43292 621 aa21.98■■□□□ 1.11
RFFL-211ENST00000584541 MYO1BO43795 1136 aa21.98■■□□□ 1.11
RFFL-211ENST00000584541 KIF4BQ2VIQ3 1234 aa21.98■■□□□ 1.11
RFFL-211ENST00000584541 RBM26Q5T8P6 1007 aaKnown RBP21.98■■□□□ 1.11
RFFL-211ENST00000584541 ADARB2Q9NS39 739 aaKnown RBP21.98■■□□□ 1.11
RFFL-211ENST00000584541 CCDC171Q6TFL3 1326 aa21.98■■□□□ 1.11
RFFL-211ENST00000584541 FOCADQ5VW36 1801 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 SPDYE2BA6NHP3 402 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 SGSM2O43147 1006 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 SPDYE6P0CI01 402 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 GNAT2P19087 354 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 EPS15P42566 896 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 DYNLL1P63167 89 aaKnown RBP21.97■■□□□ 1.11
RFFL-211ENST00000584541 TBC1D10BQ4KMP7 808 aaPredicted RBP21.97■■□□□ 1.11
RFFL-211ENST00000584541 APOBEC3HQ6NTF7 200 aaKnown RBP21.97■■□□□ 1.11
RFFL-211ENST00000584541 SAMD7Q7Z3H4 446 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 LCORLQ8N3X6 602 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 RIOK1Q9BRS2 568 aaKnown RBP21.97■■□□□ 1.11
RFFL-211ENST00000584541 CRNKL1Q9BZJ0 848 aaKnown RBP21.97■■□□□ 1.11
RFFL-211ENST00000584541 ARMT1Q9H993 441 aa21.97■■□□□ 1.11
RFFL-211ENST00000584541 CCDC129Q6ZRS4 1044 aa21.96■■□□□ 1.11
RFFL-211ENST00000584541 KIAA1211Q6ZU35 1233 aa21.96■■□□□ 1.11
RFFL-211ENST00000584541 PRMT6Q96LA8 375 aaPredicted RBP21.96■■□□□ 1.11
RFFL-211ENST00000584541 STRBPQ96SI9 672 aaKnown RBP21.96■■□□□ 1.11
RFFL-211ENST00000584541 USP40Q9NVE5 1235 aa21.96■■□□□ 1.11
RFFL-211ENST00000584541 TMOD2Q9NZR1 351 aa21.96■■□□□ 1.11
RFFL-211ENST00000584541 TEX11Q8IYF3 940 aa21.95■■□□□ 1.1
RFFL-211ENST00000584541 SH3RF3Q8TEJ3 882 aaPredicted RBP21.95■■□□□ 1.1
RFFL-211ENST00000584541 PCDHAC2Q9Y5I4 1007 aa21.95■■□□□ 1.1
RFFL-211ENST00000584541 WNT10BO00744 389 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 REC8O95072 547 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 C8orf34Q49A92 452 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 CDC42EP5Q6NZY7 148 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 ZNF589Q86UQ0 364 aaPredicted RBP21.94■■□□□ 1.1
RFFL-211ENST00000584541 DDRGK1Q96HY6 314 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 ZBED3Q96IU2 234 aaPredicted RBP21.94■■□□□ 1.1
RFFL-211ENST00000584541 TDRD3Q9H7E2 651 aaKnown RBP21.94■■□□□ 1.1
RFFL-211ENST00000584541 SLC4A4Q9Y6R1 1079 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 NAV1Q8NEY1 1877 aa21.94■■□□□ 1.1
RFFL-211ENST00000584541 EPHX2P34913 555 aa21.93■■□□□ 1.1
RFFL-211ENST00000584541 USP5P45974 858 aa21.93■■□□□ 1.1
RFFL-211ENST00000584541 RHBDL3P58872 404 aa21.93■■□□□ 1.1
RFFL-211ENST00000584541 USP50Q70EL3 339 aaPredicted RBP21.93■■□□□ 1.1
RFFL-211ENST00000584541 RPAP1Q9BWH6 1393 aaPredicted RBP21.93■■□□□ 1.1
RFFL-211ENST00000584541 APPP05067 770 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 NBPF9Q3BBW0 867 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 TRPM4Q8TD43 1214 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 NACAP1Q9BZK3 213 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 IL25Q9H293 177 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 ANO2Q9NQ90 1003 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 MYH1P12882 1939 aa21.92■■□□□ 1.1
RFFL-211ENST00000584541 PATL2C9JE40 543 aaKnown RBP21.91■■□□□ 1.1
RFFL-211ENST00000584541 EGFRP00533 1210 aa21.91■■□□□ 1.1
RFFL-211ENST00000584541 VEGFAP15692 232 aaPredicted RBP21.91■■□□□ 1.1
RFFL-211ENST00000584541 SPDYE2Q495Y8 402 aa21.91■■□□□ 1.1
RFFL-211ENST00000584541 PNMA8AQ86V59 439 aaPredicted RBP21.91■■□□□ 1.1
RFFL-211ENST00000584541 TAF1DQ9H5J8 278 aaPredicted RBP21.91■■□□□ 1.1
RFFL-211ENST00000584541 ATP8A2Q9NTI2 1148 aa21.91■■□□□ 1.1
RFFL-211ENST00000584541 ZNF70Q9UC06 446 aaPredicted RBP21.91■■□□□ 1.1
RFFL-211ENST00000584541 BAZ2AQ9UIF9 1905 aaKnown RBP21.9■■□□□ 1.1
RFFL-211ENST00000584541 CLRN2A0PK11 232 aa21.9■■□□□ 1.1
RFFL-211ENST00000584541 HSPD1P10809 573 aaKnown RBP21.9■■□□□ 1.1
RFFL-211ENST00000584541 ZNF526Q8TF50 670 aaPredicted RBP21.9■■□□□ 1.1
RFFL-211ENST00000584541 TGFBRAP1Q8WUH2 860 aa21.9■■□□□ 1.1
RFFL-211ENST00000584541 DSCC1Q9BVC3 393 aa21.9■■□□□ 1.1
RFFL-211ENST00000584541 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
RFFL-211ENST00000584541 VEZTQ9HBM0 779 aa21.9■■□□□ 1.1
RFFL-211ENST00000584541 PRKAB2O43741 272 aa21.89■■□□□ 1.09
RFFL-211ENST00000584541 GIMAP6Q6P9H5 292 aa21.89■■□□□ 1.09
RFFL-211ENST00000584541 SDR42E1Q8WUS8 393 aa21.89■■□□□ 1.09
RFFL-211ENST00000584541 IDI2Q9BXS1 227 aa21.89■■□□□ 1.09
RFFL-211ENST00000584541 GSG1L2A8MUP6 293 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 POTECB2RU33 542 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 WDHD1O75717 1129 aaPredicted RBP21.88■■□□□ 1.09
RFFL-211ENST00000584541 TDO2P48775 406 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 TNNI2P48788 182 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 PICALMQ13492 652 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 TNFAIP1Q13829 316 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 VPS53Q5VIR6 699 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 FKBP1CQ5VVH2 108 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 NAPBQ9H115 298 aa21.88■■□□□ 1.09
RFFL-211ENST00000584541 NPM3O75607 178 aaKnown RBP21.87■■□□□ 1.09
RFFL-211ENST00000584541 HIRAP54198 1017 aaPredicted RBP21.87■■□□□ 1.09
RFFL-211ENST00000584541 CACNB3P54284 484 aa21.87■■□□□ 1.09
RFFL-211ENST00000584541 EAPPQ56P03 285 aaPredicted RBP21.87■■□□□ 1.09
RFFL-211ENST00000584541 APOBEC3FQ8IUX4 373 aaKnown RBP21.87■■□□□ 1.09
RFFL-211ENST00000584541 MAPKAPK5Q8IW41 473 aa21.87■■□□□ 1.09
RFFL-211ENST00000584541 AMOTL1Q8IY63 956 aa21.87■■□□□ 1.09
RFFL-211ENST00000584541 IFNL3Q8IZI9 196 aa21.87■■□□□ 1.09
RFFL-211ENST00000584541 CTNNA3Q9UI47 895 aa21.87■■□□□ 1.09
RFFL-211ENST00000584541 POLR2AP24928 1970 aaKnown RBP21.87■■□□□ 1.09
RFFL-211ENST00000584541 LAMB1P07942 1786 aa21.87■■□□□ 1.09
RFFL-211ENST00000584541 FLT1P17948 1338 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms