RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 BRAPQ7Z569 592 aa13.71□□□□□ -0.22
ERBB2-218ENST00000584450 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.22
ERBB2-218ENST00000584450 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.22
ERBB2-218ENST00000584450 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 GNPATO15228 680 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 CAVIN2O95810 425 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 MCM7P33993 719 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 TEX35Q5T0J7 233 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 FBXO18Q8NFZ0 1043 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 ZNF274Q96GC6 653 aaPredicted RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 CCDC87Q9NVE4 849 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 ARGLU1Q9NWB6 273 aaPredicted RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 MAGEC2Q9UBF1 373 aaPredicted RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 ZNF500O60304 480 aaPredicted RBP13.7□□□□□ -0.22
ERBB2-218ENST00000584450 ATG9AQ7Z3C6 839 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 UIMC1Q96RL1 719 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 KAT14Q9H8E8 782 aa13.7□□□□□ -0.22
ERBB2-218ENST00000584450 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 GNG11P61952 73 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 RESTQ13127 1097 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 SYT10Q6XYQ8 523 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 ZHX1Q9UKY1 873 aaPredicted RBP13.69□□□□□ -0.22
ERBB2-218ENST00000584450 KCNH3Q9ULD8 1083 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 ENOX2Q16206 610 aaKnown RBP13.69□□□□□ -0.22
ERBB2-218ENST00000584450 PFKFB1P16118 471 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 GSDMDP57764 484 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 ARHGAP29Q52LW3 1261 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
ERBB2-218ENST00000584450 SAP30BPQ9UHR5 308 aaKnown RBP13.69□□□□□ -0.22
ERBB2-218ENST00000584450 RPGRQ92834 1020 aaKnown RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 XPO4Q9C0E2 1151 aaKnown RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 COBLO75128 1261 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 PDE4BQ07343 736 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 ATG3Q9NT62 314 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 USP17L21D6R901 530 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 AKNAD1Q5T1N1 836 aa13.68□□□□□ -0.22
ERBB2-218ENST00000584450 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
ERBB2-218ENST00000584450 IDEP14735 1019 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 UBA7P41226 1012 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 GOLGA8FQ08AF8 430 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 GOLGA8DPQ0D2H9 430 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 PICALMQ13492 652 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 KARSQ15046 597 aaKnown RBP13.67□□□□□ -0.22
ERBB2-218ENST00000584450 RICTORQ6R327 1708 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 KIAA1468Q9P260 1216 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 ADALQ6DHV7 355 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 CACTINQ8WUQ7 758 aaKnown RBP13.67□□□□□ -0.22
ERBB2-218ENST00000584450 EEF2KMTQ96G04 330 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 LOC102724428A0A0B4J2F2 783 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 N4BP3O15049 544 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
ERBB2-218ENST00000584450 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
ERBB2-218ENST00000584450 DNA2P51530 1060 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 SIK1P57059 783 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 RRAGBQ5VZM2 374 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 NUP88Q99567 741 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-218ENST00000584450 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 PXDNQ92626 1479 aa13.67□□□□□ -0.22
ERBB2-218ENST00000584450 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
ERBB2-218ENST00000584450 RFX5P48382 616 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-218ENST00000584450 SUSD4Q5VX71 490 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 AK7Q96M32 723 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 ERCC3P19447 782 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 FANCCQ00597 558 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 CHRNDQ07001 517 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 ZSWIM5Q9P217 1185 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 ZNF609O15014 1411 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
ERBB2-218ENST00000584450 NEMFO60524 1076 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 NR5A1Q13285 461 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
ERBB2-218ENST00000584450 UBAP1LF5GYI3 381 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms