RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PPP1R1BQ9UD71 204 aaPredicted RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 SYNRGQ9UMZ2 1314 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 KIF3CO14782 793 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 PPFIA4O75335 1185 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 MTMR3Q13615 1198 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 CHST3Q7LGC8 479 aa14.63□□□□□ -0.07
RNF43-208ENST00000584437 TRMT1LQ7Z2T5 733 aaKnown RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 MPHOSPH6Q99547 160 aaKnown RBP14.63□□□□□ -0.07
RNF43-208ENST00000584437 MIPOL1Q8TD10 442 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 ADGRL1O94910 1474 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 UTP14CQ5TAP6 766 aaKnown RBP14.62□□□□□ -0.07
RNF43-208ENST00000584437 ARHGAP24Q8N264 748 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 ZSCAN26Q16670 478 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 TMEM87BQ96K49 555 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 VPS16Q9H269 839 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 PRAG1Q86YV5 1406 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 NDC80O14777 642 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 INF2Q27J81 1249 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 CNNM4Q6P4Q7 775 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 SMARCC2Q8TAQ2 1214 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 VCXQ9H320 206 aa14.62□□□□□ -0.07
RNF43-208ENST00000584437 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 TPD52P55327 224 aaPredicted RBP14.61□□□□□ -0.07
RNF43-208ENST00000584437 CEP85LQ5SZL2 805 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
RNF43-208ENST00000584437 VWA3AA6NCI4 1184 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 RAPGEF1Q13905 1077 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 SBNO2Q9Y2G9 1366 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 DEXIO95424 95 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 SPATS2Q86XZ4 545 aaKnown RBP14.61□□□□□ -0.07
RNF43-208ENST00000584437 TSPYL6Q8N831 410 aa14.61□□□□□ -0.07
RNF43-208ENST00000584437 TRAF5O00463 557 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 SLC27A2O14975 620 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 FOXO3O43524 673 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 IQCDQ96DY2 449 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 EXOC5O00471 708 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 PAK1Q13153 545 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 PLCB1Q9NQ66 1216 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 FAM169AQ9Y6X4 670 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 SPDYE3A6NKU9 549 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 CCDC51Q96ER9 411 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 ERCC5P28715 1186 aaPredicted RBP14.6□□□□□ -0.07
RNF43-208ENST00000584437 MAP2K2P36507 400 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 VSIG1Q86XK7 387 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 EIF2AK4Q9P2K8 1649 aaKnown RBP14.6□□□□□ -0.07
RNF43-208ENST00000584437 EPB41P11171 864 aaKnown RBP14.6□□□□□ -0.07
RNF43-208ENST00000584437 TNNI2P48788 182 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 UBL4BQ8N7F7 174 aa14.6□□□□□ -0.07
RNF43-208ENST00000584437 ZNF202O95125 648 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 ERCC6LQ2NKX8 1250 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 ZBTB9Q96C00 473 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 FAM184BQ9ULE4 1060 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 BRD1O95696 1058 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 WHAMMP3Q1A5X7 153 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 CCDC38Q502W7 563 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 ZMYM3Q14202 1370 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 SGSM2O43147 1006 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 SPOPO43791 374 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 CFAP221Q4G0U5 840 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 PLCD3Q8N3E9 789 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 CLGNO14967 610 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 KRT9P35527 623 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 PDE4DQ08499 809 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 TFCP2Q12800 502 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 EIF4A2Q14240 407 aaKnown RBP14.59□□□□□ -0.07
RNF43-208ENST00000584437 SLC4A8Q2Y0W8 1093 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 CSGALNACT2Q8N6G5 542 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.59□□□□□ -0.07
RNF43-208ENST00000584437 NFE2L3Q9Y4A8 694 aa14.59□□□□□ -0.07
RNF43-208ENST00000584437 CPA1P15085 419 aa14.58□□□□□ -0.07
RNF43-208ENST00000584437 TNFAIP3P21580 790 aa14.58□□□□□ -0.07
RNF43-208ENST00000584437 KIFAP3Q92845 792 aa14.58□□□□□ -0.07
RNF43-208ENST00000584437 MCUR1Q96AQ8 359 aa14.58□□□□□ -0.07
RNF43-208ENST00000584437 FRMD4BQ9Y2L6 1034 aa14.58□□□□□ -0.07
RNF43-208ENST00000584437 MSH6P52701 1360 aa14.58□□□□□ -0.07
RNF43-208ENST00000584437 PLCG2P16885 1265 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 ARL1P40616 181 aaPredicted RBP14.58□□□□□ -0.08
RNF43-208ENST00000584437 ASIC2Q16515 512 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 WDR78Q5VTH9 848 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
RNF43-208ENST00000584437 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 TMEM63CQ9P1W3 806 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 POLKQ9UBT6 870 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 INSRP06213 1382 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 SND1Q7KZF4 910 aaKnown RBP eCLIP14.58□□□□□ -0.08
RNF43-208ENST00000584437 PPP1R12CQ9BZL4 782 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 DCAF17Q5H9S7 520 aaPredicted RBP14.58□□□□□ -0.08
RNF43-208ENST00000584437 RPUSD2Q8IZ73 545 aaKnown RBP14.58□□□□□ -0.08
RNF43-208ENST00000584437 GADD45BO75293 160 aaPredicted RBP14.58□□□□□ -0.08
RNF43-208ENST00000584437 ARID4AP29374 1257 aaPredicted RBP14.58□□□□□ -0.08
RNF43-208ENST00000584437 MAGEA1P43355 309 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 ZNF174Q15697 407 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 ZNF365Q70YC5 407 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 PHLDB2Q86SQ0 1253 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 FCHSD1Q86WN1 690 aa14.58□□□□□ -0.08
RNF43-208ENST00000584437 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms