RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-223ENST00000583877 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
NUP85-223ENST00000583877 F6X3S4 739 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 PYGBP11216 843 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 PRMT2P55345 433 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
NUP85-223ENST00000583877 ERO1BQ86YB8 467 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 PHIPQ8WWQ0 1821 aa11.05□□□□□ -0.64
NUP85-223ENST00000583877 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 H0YGN5 161 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 FAM83AQ86UY5 434 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 SH3TC2Q8TF17 1288 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 TBC1D22AQ8WUA7 517 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 TEKT1Q969V4 418 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 HOOK2Q96ED9 719 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 MRIQ9BWK5 157 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 ARHGAP39Q9C0H5 1083 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 C9orf78Q9NZ63 289 aaPredicted RBP11.04□□□□□ -0.64
NUP85-223ENST00000583877 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 MROH5Q6ZUA9 1318 aa11.04□□□□□ -0.64
NUP85-223ENST00000583877 IRF6O14896 467 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 ALDH1L1O75891 902 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
NUP85-223ENST00000583877 PPIL2Q13356 520 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 GRIK5Q16478 980 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 FKBP1CQ5VVH2 108 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 FBXO33Q7Z6M2 555 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 WRNIP1Q96S55 665 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
NUP85-223ENST00000583877 RIPOR2Q9Y4F9 1068 aa11.03□□□□□ -0.64
NUP85-223ENST00000583877 RPAP1Q9BWH6 1393 aaPredicted RBP11.03□□□□□ -0.64
NUP85-223ENST00000583877 CACNB3P54284 484 aa11.02□□□□□ -0.65
NUP85-223ENST00000583877 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
NUP85-223ENST00000583877 DCAF15Q66K64 600 aa11.02□□□□□ -0.65
NUP85-223ENST00000583877 WDR63Q8IWG1 891 aa11.02□□□□□ -0.65
NUP85-223ENST00000583877 ZKSCAN4Q969J2 545 aaPredicted RBP11.02□□□□□ -0.65
NUP85-223ENST00000583877 ZDHHC15Q96MV8 337 aa11.02□□□□□ -0.65
NUP85-223ENST00000583877 TMOD2Q9NZR1 351 aa11.02□□□□□ -0.65
NUP85-223ENST00000583877 DOCK1Q14185 1865 aa11.02□□□□□ -0.65
NUP85-223ENST00000583877 ATAD5Q96QE3 1844 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
NUP85-223ENST00000583877 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
NUP85-223ENST00000583877 PPATQ06203 517 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 CHAF1AQ13111 956 aaPredicted RBP11.01□□□□□ -0.65
NUP85-223ENST00000583877 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 CAVIN4Q5BKX8 364 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 C17orf99Q6UX52 265 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 SHISA4Q96DD7 197 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 KAZALD1Q96I82 304 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 SRCIN1Q9C0H9 1055 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 IQSEC3Q9UPP2 1182 aaPredicted RBP11.01□□□□□ -0.65
NUP85-223ENST00000583877 SUGT1Q9Y2Z0 365 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 MAST3O60307 1309 aa11.01□□□□□ -0.65
NUP85-223ENST00000583877 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
NUP85-223ENST00000583877 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
NUP85-223ENST00000583877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
NUP85-223ENST00000583877 HOXD10P28358 340 aa11□□□□□ -0.65
NUP85-223ENST00000583877 PSMC4P43686 418 aa11□□□□□ -0.65
NUP85-223ENST00000583877 MTFR1Q15390 333 aa11□□□□□ -0.65
NUP85-223ENST00000583877 APOBEC3HQ6NTF7 200 aaKnown RBP11□□□□□ -0.65
NUP85-223ENST00000583877 HHIPL2Q6UWX4 724 aa11□□□□□ -0.65
NUP85-223ENST00000583877 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
NUP85-223ENST00000583877 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
NUP85-223ENST00000583877 SUCLG2Q96I99 432 aa11□□□□□ -0.65
NUP85-223ENST00000583877 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
NUP85-223ENST00000583877 TRIM47Q96LD4 638 aa11□□□□□ -0.65
NUP85-223ENST00000583877 ZNF341Q9BYN7 854 aa11□□□□□ -0.65
NUP85-223ENST00000583877 SRRDQ9UH36 339 aa11□□□□□ -0.65
NUP85-223ENST00000583877 UTYO14607 1347 aa11□□□□□ -0.65
NUP85-223ENST00000583877 ADGRA2Q96PE1 1338 aa11□□□□□ -0.65
NUP85-223ENST00000583877 PDE8BO95263 885 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 NBPF7P0C2Y1 421 aaPredicted RBP10.99□□□□□ -0.65
NUP85-223ENST00000583877 OSBPP22059 807 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 CTGFP29279 349 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 GRK4P32298 578 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 GJA8P48165 433 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
NUP85-223ENST00000583877 METTL24Q5JXM2 366 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 SLC4A10Q6U841 1118 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 UBE2Q1Q7Z7E8 422 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.99□□□□□ -0.65
NUP85-223ENST00000583877 RAET1EQ8TD07 263 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 DPF3Q92784 378 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
NUP85-223ENST00000583877 CPA4Q9UI42 421 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 KCNH4Q9UQ05 1017 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 KIF16BQ96L93 1317 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 UNC80Q8N2C7 3258 aa10.99□□□□□ -0.65
NUP85-223ENST00000583877 PDHXO00330 501 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 FMNL1O95466 1100 aaPredicted RBP10.98□□□□□ -0.65
NUP85-223ENST00000583877 GJB1P08034 283 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 CCL5P13501 91 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 INPP5BP32019 993 aa10.98□□□□□ -0.65
NUP85-223ENST00000583877 BCAMP50895 628 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms