RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 POTECB2RU33 542 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 MYO1BO43795 1136 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 DYNLL1P63167 89 aaKnown RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 TICAM2Q86XR7 235 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 MTMR14Q8NCE2 650 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 PUS7LQ9H0K6 701 aaKnown RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 TAF1DQ9H5J8 278 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 TDRD3Q9H7E2 651 aaKnown RBP13.17□□□□□ -0.3
TOP3A-216ENST00000583804 USP40Q9NVE5 1235 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 DOCK2Q92608 1830 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 WNT10BO00744 389 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 CHMLP26374 656 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 HIRAP54198 1017 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 USP50Q70EL3 339 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 IL25Q9H293 177 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 RFX7Q2KHR2 1363 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 M0R2C6 588 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 MBD4O95243 580 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 PPP4CP60510 307 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 ZBED3Q96IU2 234 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-216ENST00000583804 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 HELLSQ9NRZ9 838 aa13.16□□□□□ -0.3
TOP3A-216ENST00000583804 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-216ENST00000583804 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 PLCG2P16885 1265 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 CACNB3P54284 484 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 LCORLQ8N3X6 602 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 RUFY2Q8WXA3 655 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.3
TOP3A-216ENST00000583804 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
TOP3A-216ENST00000583804 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-216ENST00000583804 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.31
TOP3A-216ENST00000583804 MAST2Q6P0Q8 1798 aa13.14□□□□□ -0.31
TOP3A-216ENST00000583804 GPAA1O43292 621 aa13.14□□□□□ -0.31
TOP3A-216ENST00000583804 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
TOP3A-216ENST00000583804 ANGEL2Q5VTE6 544 aaKnown RBP13.14□□□□□ -0.31
TOP3A-216ENST00000583804 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
TOP3A-216ENST00000583804 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 APPP05067 770 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 USP5P45974 858 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 RHBDL3P58872 404 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 PICALMQ13492 652 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
TOP3A-216ENST00000583804 ESYT1Q9BSJ8 1104 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 CRNKL1Q9BZJ0 848 aaKnown RBP13.13□□□□□ -0.31
TOP3A-216ENST00000583804 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 SCN4AP35499 1836 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 MYH7P12883 1935 aa13.13□□□□□ -0.31
TOP3A-216ENST00000583804 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
TOP3A-216ENST00000583804 POTEIP0CG38 1075 aa13.12□□□□□ -0.31
TOP3A-216ENST00000583804 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
TOP3A-216ENST00000583804 NFIAQ12857 509 aa13.12□□□□□ -0.31
TOP3A-216ENST00000583804 TGFBRAP1Q8WUH2 860 aa13.12□□□□□ -0.31
TOP3A-216ENST00000583804 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
TOP3A-216ENST00000583804 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
TOP3A-216ENST00000583804 PRKAB2O43741 272 aa13.11□□□□□ -0.31
TOP3A-216ENST00000583804 TCP10Q12799 353 aa13.11□□□□□ -0.31
TOP3A-216ENST00000583804 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-216ENST00000583804 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
TOP3A-216ENST00000583804 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
TOP3A-216ENST00000583804 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
TOP3A-216ENST00000583804 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
TOP3A-216ENST00000583804 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
TOP3A-216ENST00000583804 SGSM2O43147 1006 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-216ENST00000583804 GNAT2P19087 354 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 TNNI2P48788 182 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
TOP3A-216ENST00000583804 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
TOP3A-216ENST00000583804 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 FKBP1CQ5VVH2 108 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms