RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 GIMAP6Q6P9H5 292 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
UBBP4-201ENST00000583708 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 PRMT6Q96LA8 375 aaPredicted RBP11.22□□□□□ -0.61
UBBP4-201ENST00000583708 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
UBBP4-201ENST00000583708 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
UBBP4-201ENST00000583708 ZNF384Q8TF68 577 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 DDRGK1Q96HY6 314 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.61
UBBP4-201ENST00000583708 NMRK2Q9NPI5 230 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
UBBP4-201ENST00000583708 ZNF70Q9UC06 446 aaPredicted RBP11.21□□□□□ -0.61
UBBP4-201ENST00000583708 MYH13Q9UKX3 1938 aa11.21□□□□□ -0.62
UBBP4-201ENST00000583708 RAD50Q92878 1312 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 GSPT1P15170 499 aaKnown RBP11.2□□□□□ -0.62
UBBP4-201ENST00000583708 BTDP43251 543 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 HIRAP54198 1017 aaPredicted RBP11.2□□□□□ -0.62
UBBP4-201ENST00000583708 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
UBBP4-201ENST00000583708 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 CDC42EP5Q6NZY7 148 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 AIDAQ96BJ3 306 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 EDC3Q96F86 508 aaKnown RBP11.2□□□□□ -0.62
UBBP4-201ENST00000583708 DHX36Q9H2U1 1008 aaKnown RBP11.2□□□□□ -0.62
UBBP4-201ENST00000583708 DIAPH3Q9NSV4 1193 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
UBBP4-201ENST00000583708 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 KIF3CO14782 793 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 EPB41L2O43491 1005 aaKnown RBP11.19□□□□□ -0.62
UBBP4-201ENST00000583708 RGS3P49796 1198 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 NT5C2P49902 561 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 RHBDL3P58872 404 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 NBPF9Q3BBW0 867 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 SUPT20HL1Q3ZLR7 823 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 EAPPQ56P03 285 aaPredicted RBP11.19□□□□□ -0.62
UBBP4-201ENST00000583708 FAM151AQ8WW52 585 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 RIOK1Q9BRS2 568 aaKnown RBP11.19□□□□□ -0.62
UBBP4-201ENST00000583708 NACAP1Q9BZK3 213 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
UBBP4-201ENST00000583708 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
UBBP4-201ENST00000583708 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
UBBP4-201ENST00000583708 CHMLP26374 656 aa11.18□□□□□ -0.62
UBBP4-201ENST00000583708 ALX1Q15699 326 aa11.18□□□□□ -0.62
UBBP4-201ENST00000583708 AMOTL1Q8IY63 956 aa11.18□□□□□ -0.62
UBBP4-201ENST00000583708 TEX11Q8IYF3 940 aa11.18□□□□□ -0.62
UBBP4-201ENST00000583708 ZNF526Q8TF50 670 aaPredicted RBP11.18□□□□□ -0.62
UBBP4-201ENST00000583708 STRBPQ96SI9 672 aaKnown RBP11.18□□□□□ -0.62
UBBP4-201ENST00000583708 AATFQ9NY61 560 aaKnown RBP eCLIP11.18□□□□□ -0.62
UBBP4-201ENST00000583708 COL2A1P02458 1487 aaPredicted RBP11.18□□□□□ -0.62
UBBP4-201ENST00000583708 DOCK2Q92608 1830 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 SHTN1A0MZ66 631 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
UBBP4-201ENST00000583708 CDC45O75419 566 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 WDHD1O75717 1129 aaPredicted RBP11.17□□□□□ -0.62
UBBP4-201ENST00000583708 NF2P35240 595 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 FKBP1BP68106 108 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 ANGEL2Q5VTE6 544 aaKnown RBP11.17□□□□□ -0.62
UBBP4-201ENST00000583708 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 TTC6Q86TZ1 520 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 FOXP4Q8IVH2 680 aaPredicted RBP11.17□□□□□ -0.62
UBBP4-201ENST00000583708 OSBP2Q969R2 916 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 GGA3Q9NZ52 723 aa11.17□□□□□ -0.62
UBBP4-201ENST00000583708 GPAA1O43292 621 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 TBC1D12O60347 775 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 MBD4O95243 580 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 EGFRP00533 1210 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 USP5P45974 858 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 RASA3Q14644 834 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 ADGRA1Q86SQ6 560 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 PUS7LQ9H0K6 701 aaKnown RBP11.16□□□□□ -0.62
UBBP4-201ENST00000583708 VEZTQ9HBM0 779 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 PI4KBQ9UBF8 816 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 CTNNA3Q9UI47 895 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
UBBP4-201ENST00000583708 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 ITGBL1O95965 494 aaPredicted RBP11.15□□□□□ -0.62
UBBP4-201ENST00000583708 NMIQ13287 307 aaPredicted RBP11.15□□□□□ -0.62
UBBP4-201ENST00000583708 SBK1Q52WX2 424 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 DCAF15Q66K64 600 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 KIAA1211Q6ZU35 1233 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.62
UBBP4-201ENST00000583708 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
UBBP4-201ENST00000583708 DSCC1Q9BVC3 393 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 ZNF287Q9HBT7 754 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 FAM198AQ9UFP1 575 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 MKRN1Q9UHC7 482 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms