RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	WISP1	O95388	367 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	APBA3	O96018	575 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	PF4	P02776	101 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	CTSB	P07858	339 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	EIF4A3	P38919	411 aa	Known RBP	7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	LMNB2	Q03252	620 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	CAMK2G	Q13555	558 aa	Predicted RBP	7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	SNAP47	Q5SQN1	464 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	DIEXF	Q68CQ4	756 aa	Known RBP	7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	JARID2	Q92833	1246 aa	Predicted RBP	7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	RHOV	Q96L33	236 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	RUSC1	Q9BVN2	902 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	RAD18	Q9NS91	495 aa		7.1	□□□□□ -1.27
NUP85-222	ENST00000583569	TRIM37	O94972	964 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	DLGAP3	O95886	979 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	SEPT6	Q14141	434 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	EXOSC6	Q5RKV6	272 aa	Known RBP	7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	SCARA3	Q6AZY7	606 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	MPRIP	Q6WCQ1	1025 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	ALYREF	Q86V81	257 aa	Known RBP	7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	KIAA0825	Q8IV33	1275 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	TRIM42	Q8IWZ5	723 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	GOLM1	Q8NBJ4	401 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	NACC1	Q96RE7	527 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	SPON2	Q9BUD6	331 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	ACBD3	Q9H3P7	528 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	KRT82	Q9NSB4	513 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	ADAMTS1	Q9UHI8	967 aa		7.09	□□□□□ -1.27
NUP85-222	ENST00000583569	SELP	P16109	830 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	LIG1	P18858	919 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	NUTM2G	Q5VZR2	741 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	FBXL19	Q6PCT2	694 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	KIAA1211	Q6ZU35	1233 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	GPBAR1	Q8TDU6	330 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	LENG1	Q96BZ8	264 aa	Predicted RBP	7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	RNF208	Q9H0X6	261 aa		7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.08	□□□□□ -1.28
NUP85-222	ENST00000583569	C9orf172	C9J069	976 aa		7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	ZNF862	O60290	1169 aa		7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	SLFN14	P0C7P3	912 aa		7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	ZC3H6	P61129	1189 aa	Known RBP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	NRG1	Q02297	640 aa	Predicted RBP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	CCDC84	Q86UT8	332 aa	Predicted RBP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	AGGF1	Q8N302	714 aa	eCLIP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	WDR89	Q96FK6	387 aa	Predicted RBP	7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	PCDHA4	Q9UN74	947 aa		7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	INPP5F	Q9Y2H2	1132 aa		7.07	□□□□□ -1.28
NUP85-222	ENST00000583569	MEGF11	A6BM72	1044 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569		F8W735	103 aa	Predicted RBP	7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	AOC2	O75106	756 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	F13A1	P00488	732 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	PTPN11	Q06124	597 aa	Predicted RBP	7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	AKAP4	Q5JQC9	854 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	TMEM130	Q8N3G9	435 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	GAL3ST3	Q96A11	431 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	WDR18	Q9BV38	432 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	TMPRSS13	Q9BYE2	586 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	AKTIP	Q9H8T0	292 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	CAPN10	Q9HC96	672 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	CYP4F12	Q9HCS2	524 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	CACNA2D2	Q9NY47	1150 aa		7.06	□□□□□ -1.28
NUP85-222	ENST00000583569	ALX3	O95076	343 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	BPNT1	O95861	308 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	GART	P22102	1010 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	TNNI2	P48788	182 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	PAK2	Q13177	524 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	GNL2	Q13823	731 aa	Known RBP	7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	KIF4B	Q2VIQ3	1234 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	FDX2	Q6P4F2	183 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	FAM196A	Q6ZSG2	479 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	C12orf50	Q8NA57	414 aa	Predicted RBP	7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	GATAD2B	Q8WXI9	593 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	KCNQ5	Q9NR82	932 aa		7.05	□□□□□ -1.28
NUP85-222	ENST00000583569	TLR3	O15455	904 aa	Known RBP	7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	GREM1	O60565	184 aa		7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	GLB1	P16278	677 aa		7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	APOBR	Q0VD83	1088 aa		7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	ANKRD34A	Q69YU3	496 aa		7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	SMG8	Q8ND04	991 aa	Known RBP	7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	ELMO3	Q96BJ8	720 aa		7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	UBP1	Q9NZI7	540 aa		7.04	□□□□□ -1.28
NUP85-222	ENST00000583569	FAM221A	A4D161	298 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	CILP	O75339	1184 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	IREB2	P48200	963 aa	Known RBP	7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	ID3	Q02535	119 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	NAALADL2	Q58DX5	795 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	HDX	Q7Z353	690 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	FBXO27	Q8NI29	283 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	WFDC12	Q8WWY7	111 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	GPRASP2	Q96D09	838 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	EAF1	Q96JC9	268 aa	Predicted RBP	7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	DCAF5	Q96JK2	942 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	NT5C1A	Q9BXI3	368 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	CEP41	Q9BYV8	373 aa		7.03	□□□□□ -1.28
NUP85-222	ENST00000583569	SUGCT	Q9HAC7	445 aa		7.03	□□□□□ -1.28

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