RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 CAVIN1Q6NZI2 390 aaKnown RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 FOXD4L3Q6VB84 417 aaPredicted RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 VPS37DQ86XT2 251 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 MIGA1Q8NAN2 632 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 NCOA7Q8NI08 942 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 GPT2Q8TD30 523 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 RPGRQ92834 1020 aaKnown RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 NAPBQ9H115 298 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 GDPD2Q9HCC8 539 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 GPHNQ9NQX3 736 aaPredicted RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 RAI14Q9P0K7 980 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 LRP2BPQ9P2M1 347 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 DENND2AQ9ULE3 1009 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 ISY1Q9ULR0 285 aaKnown RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 NAP1L2Q9ULW6 460 aaPredicted RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 CNPY2Q9Y2B0 182 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 SNED1Q8TER0 1413 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 SIPA1L1O43166 1804 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 SLX4Q8IY92 1834 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ARFGEF1Q9Y6D6 1849 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ROBO3Q96MS0 1386 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 KLF18A0A0U1RQI7 1052 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 GOLGA6L3A6NEY3 463 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 B4E1Z4 1266 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF213O14771 459 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ZBTB22O15209 634 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 UFL1O94874 794 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 CTDNEP1O95476 244 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 APPP05067 770 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 POTEJP0CG39 1038 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 GNAT2P19087 354 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 NCLP19338 710 aaKnown RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 CYP7A1P22680 504 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 TM4SF1P30408 202 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 FOSBP53539 338 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 CHAF1AQ13111 956 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 RESTQ13127 1097 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ZSCAN23Q3MJ62 389 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 CHST3Q7LGC8 479 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 FBXO33Q7Z6M2 555 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 FERMT3Q86UX7 667 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 FBXL16Q8N461 479 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF384Q8TF68 577 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 DDX11Q96FC9 970 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 FAM84BQ96KN1 310 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 GPR101Q96P66 508 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 LLPHQ9BRT6 129 aaKnown RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 NACAP1Q9BZK3 213 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 NCOA5Q9HCD5 579 aaKnown RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 TFCP2L1Q9NZI6 479 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 RBM27Q9P2N5 1060 aaKnown RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ABCF2Q9UG63 623 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 KIF3AQ9Y496 699 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 ATP6V1DQ9Y5K8 247 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 C10orf71Q711Q0 1435 aa6.48□□□□□ -1.37
CRLF3-204ENST00000583527 GREB1LQ9C091 1923 aaPredicted RBP6.48□□□□□ -1.37
CRLF3-204ENST00000583527 BRCA1P38398 1863 aaKnown RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 MAGEB6P1A0A0J9YX57 407 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 GSG1L2A8MUP6 293 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 PPEF1O14829 653 aaPredicted RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 PRKAB2O43741 272 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 PRPF40AO75400 957 aaKnown RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 SERPINB2P05120 415 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 PRDX5P30044 214 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 HIBADHP31937 336 aaKnown RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 EVCP57679 992 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF445P59923 1031 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 TRDNQ13061 729 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 NAA16Q6N069 864 aaPredicted RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 CYB5R4Q7L1T6 521 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF804AQ7Z570 1209 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 MICU3Q86XE3 530 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 DZIP1Q86YF9 867 aaKnown RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 RAB11FIP4Q86YS3 637 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 FAM184AQ8NB25 1140 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 NKX2-3Q8TAU0 364 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 SDR42E1Q8WUS8 393 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 STAG1Q8WVM7 1258 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 TMEM63CQ9P1W3 806 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 ANGEL1Q9UNK9 670 aaKnown RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 NSFL1CQ9UNZ2 370 aaKnown RBP6.47□□□□□ -1.37
CRLF3-204ENST00000583527 HPS5Q9UPZ3 1129 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 JAG2Q9Y219 1238 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 SLC4A4Q9Y6R1 1079 aa6.47□□□□□ -1.37
CRLF3-204ENST00000583527 H3BQV1 296 aa6.46□□□□□ -1.38
CRLF3-204ENST00000583527 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
CRLF3-204ENST00000583527 PDIA3P30101 505 aaKnown RBP6.46□□□□□ -1.38
CRLF3-204ENST00000583527 DYNLL1P63167 89 aaKnown RBP6.46□□□□□ -1.38
CRLF3-204ENST00000583527 CCT2P78371 535 aaKnown RBP6.46□□□□□ -1.38
CRLF3-204ENST00000583527 KRT85P78386 507 aa6.46□□□□□ -1.38
CRLF3-204ENST00000583527 GPSM2P81274 684 aa6.46□□□□□ -1.38
CRLF3-204ENST00000583527 MECOMQ03112 1051 aa6.46□□□□□ -1.38
CRLF3-204ENST00000583527 DNM1Q05193 864 aaKnown RBP6.46□□□□□ -1.38
CRLF3-204ENST00000583527 CTDSPL2Q05D32 466 aa6.46□□□□□ -1.38
CRLF3-204ENST00000583527 PPARAQ07869 468 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms