RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FBXO11Q86XK2 927 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 DTWD1Q8N5C7 304 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 KCNB2Q92953 911 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 TGIF2Q9GZN2 237 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 ACBD3Q9H3P7 528 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 PCDHB5Q9Y5E4 795 aa9.04□□□□□ -0.96
SMARCE1-219ENST00000583294 DYRK3O43781 588 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 ADAM11O75078 769 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 PF4P02776 101 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 CYP11A1P05108 521 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 TFE3P19532 575 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 LMNB1P20700 586 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 MPRIPQ6WCQ1 1025 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 AGMOQ6ZNB7 445 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 EMILIN2Q9BXX0 1053 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 USP21Q9UK80 565 aa9.03□□□□□ -0.96
SMARCE1-219ENST00000583294 DLL1O00548 723 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 CTSBP07858 339 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 GSTP1P09211 210 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 MAP1SQ66K74 1059 aaPredicted RBP9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 LLGL2Q6P1M3 1020 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 TXNRD3Q86VQ6 643 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 UBASH3BQ8TF42 649 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 NRSN2Q9GZP1 204 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 ADAMTS1Q9UHI8 967 aa9.02□□□□□ -0.97
SMARCE1-219ENST00000583294 EIF4A3P38919 411 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 TNNI2P48788 182 aa9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 RPS26P62854 115 aaKnown RBP9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 NRG1Q02297 640 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 CAMK2GQ13555 558 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 LRRC14Q15048 493 aa9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 ZMYM1Q5SVZ6 1142 aa9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 PDZD3Q86UT5 571 aa9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 JARID2Q92833 1246 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 CYP8B1Q9UNU6 501 aa9.01□□□□□ -0.97
SMARCE1-219ENST00000583294 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 ZNF252P-AS1Q0IIN9 211 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 SEPT6Q14141 434 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 PDE3AQ14432 1141 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 DUOXA2Q1HG44 320 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 SNAP47Q5SQN1 464 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 RHOVQ96L33 236 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 CCDC86Q9H6F5 360 aaKnown RBP9□□□□□ -0.97
SMARCE1-219ENST00000583294 CAPN10Q9HC96 672 aa9□□□□□ -0.97
SMARCE1-219ENST00000583294 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 WISP1O95388 367 aa8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 DLGAP3O95886 979 aa8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 LMNB2Q03252 620 aa8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 GOLM1Q8NBJ4 401 aa8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 ZNF296Q8WUU4 475 aaPredicted RBP8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 SPON2Q9BUD6 331 aa8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 MIR1-1HGQ9H1L0 117 aa8.99□□□□□ -0.97
SMARCE1-219ENST00000583294 LIG1P18858 919 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 ZC3H6P61129 1189 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 PTPN11Q06124 597 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 PRSS36Q5K4E3 855 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 FBXL19Q6PCT2 694 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 BNC2Q6ZN30 1099 aaPredicted RBP8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 KIAA0825Q8IV33 1275 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 GPBAR1Q8TDU6 330 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 DCAF11Q8TEB1 546 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 TP53INP1Q96A56 240 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 ACSBG1Q96GR2 724 aa8.98□□□□□ -0.97
SMARCE1-219ENST00000583294 GARTP22102 1010 aa8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 IREB2P48200 963 aaKnown RBP8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 PAK2Q13177 524 aa8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 NAALADL2Q58DX5 795 aa8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 ACAD11Q709F0 780 aa8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 WFDC12Q8WWY7 111 aa8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 INPP5FQ9Y2H2 1132 aa8.97□□□□□ -0.97
SMARCE1-219ENST00000583294 ZNF862O60290 1169 aa8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 F13A1P00488 732 aa8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 IGF2-ASQ6U949 168 aa8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 TRIM42Q8IWZ5 723 aa8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 GAL3ST3Q96A11 431 aa8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 SSBP4Q9BWG4 385 aaPredicted RBP8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 SUPT16HQ9Y5B9 1047 aaKnown RBP8.96□□□□□ -0.98
SMARCE1-219ENST00000583294 TLR3O15455 904 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 TRIM37O94972 964 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 H2AFB2P0C5Z0 115 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 NOS3P29474 1203 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 KIAA1211Q6ZU35 1233 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 FBXO27Q8NI29 283 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 RUSC1Q9BVN2 902 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 RAD18Q9NS91 495 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 PCDHA4Q9UN74 947 aa8.95□□□□□ -0.98
SMARCE1-219ENST00000583294 EXOSC6Q5RKV6 272 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-219ENST00000583294 AGGF1Q8N302 714 aaeCLIP8.94□□□□□ -0.98
SMARCE1-219ENST00000583294 EAF1Q96JC9 268 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-219ENST00000583294 MRPL18Q9H0U6 180 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-219ENST00000583294 KRT82Q9NSB4 513 aa8.94□□□□□ -0.98
SMARCE1-219ENST00000583294 UBP1Q9NZI7 540 aa8.94□□□□□ -0.98
SMARCE1-219ENST00000583294 GREM1O60565 184 aa8.93□□□□□ -0.98
SMARCE1-219ENST00000583294 ALX3O95076 343 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms