RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 GIMAP6Q6P9H5 292 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 NAPBQ9H115 298 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 KCNQ5Q9NR82 932 aa17.45■□□□□ 0.38
SENP3-208ENST00000583277 LAMB1P07942 1786 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 NAV1Q8NEY1 1877 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 ST18O60284 1047 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 CYP21A2P08686 494 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
SENP3-208ENST00000583277 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
SENP3-208ENST00000583277 IFNL3Q8IZI9 196 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 IPO9Q96P70 1041 aaKnown RBP17.44■□□□□ 0.38
SENP3-208ENST00000583277 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 BAZ2AQ9UIF9 1905 aaKnown RBP17.44■□□□□ 0.38
SENP3-208ENST00000583277 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
SENP3-208ENST00000583277 BTDP43251 543 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 TDO2P48775 406 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 RASSF7Q02833 373 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 RSBN1LQ6PCB5 846 aaPredicted RBP17.43■□□□□ 0.38
SENP3-208ENST00000583277 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 SNX21Q969T3 373 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 MXD3Q9BW11 206 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
SENP3-208ENST00000583277 ATP8A2Q9NTI2 1148 aa17.43■□□□□ 0.38
SENP3-208ENST00000583277 ECM29Q5VYK3 1845 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 ADAMTSL1Q8N6G6 1762 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 F8W031 263 aaPredicted RBP17.42■□□□□ 0.38
SENP3-208ENST00000583277 ZNF213O14771 459 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 PRKAB2O43741 272 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 VIL1P09327 827 aaKnown RBP17.42■□□□□ 0.38
SENP3-208ENST00000583277 HSCBQ8IWL3 235 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 JAKMIP1Q96N16 626 aaKnown RBP17.42■□□□□ 0.38
SENP3-208ENST00000583277 DAGLAQ9Y4D2 1042 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 SBF1O95248 1867 aa17.42■□□□□ 0.38
SENP3-208ENST00000583277 RAD17O75943 681 aa17.41■□□□□ 0.38
SENP3-208ENST00000583277 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
SENP3-208ENST00000583277 KIAA0825Q8IV33 1275 aa17.41■□□□□ 0.38
SENP3-208ENST00000583277 SERPINA10Q9UK55 444 aa17.41■□□□□ 0.38
SENP3-208ENST00000583277 PSMD14O00487 310 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 HMGB1P09429 215 aaKnown RBP17.4■□□□□ 0.38
SENP3-208ENST00000583277 NEK4P51957 841 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 TNIP1Q15025 636 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 SDR42E1Q8WUS8 393 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 ZDHHC15Q96MV8 337 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
SENP3-208ENST00000583277 CYP46A1Q9Y6A2 500 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
SENP3-208ENST00000583277 CRKP46108 304 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 MCM2P49736 904 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 SCNN1DP51172 638 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 CIAPIN1Q6FI81 312 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 ARHGAP27Q6ZUM4 889 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
SENP3-208ENST00000583277 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
SENP3-208ENST00000583277 LMNB1P20700 586 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 USP5P45974 858 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 MMP14P50281 582 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 CXCL9Q07325 125 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 BLOC1S2Q6QNY1 142 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 UPF3BQ9BZI7 483 aaKnown RBP17.39■□□□□ 0.37
SENP3-208ENST00000583277 DCP1AQ9NPI6 582 aaPredicted RBP17.39■□□□□ 0.37
SENP3-208ENST00000583277 ARPP21Q9UBL0 812 aaPredicted RBP17.39■□□□□ 0.37
SENP3-208ENST00000583277 HDAC9Q9UKV0 1011 aa17.39■□□□□ 0.37
SENP3-208ENST00000583277 E7EWF7 191 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 EIF6P56537 245 aaKnown RBP17.38■□□□□ 0.37
SENP3-208ENST00000583277 HAND2P61296 217 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 GMLQ99445 158 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 TBC1D2Q9BYX2 928 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 TAF6LQ9Y6J9 622 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 MYH1P12882 1939 aa17.38■□□□□ 0.37
SENP3-208ENST00000583277 FZD9O00144 591 aa17.37■□□□□ 0.37
SENP3-208ENST00000583277 RPS12P25398 132 aaKnown RBP17.37■□□□□ 0.37
SENP3-208ENST00000583277 RHBDL3P58872 404 aa17.37■□□□□ 0.37
SENP3-208ENST00000583277 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
SENP3-208ENST00000583277 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
SENP3-208ENST00000583277 ANAPC4Q9UJX5 808 aa17.37■□□□□ 0.37
SENP3-208ENST00000583277 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 PPARAQ07869 468 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 TRDNQ13061 729 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 SBK1Q52WX2 424 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
SENP3-208ENST00000583277 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
SENP3-208ENST00000583277 PRELPP51888 382 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 RBM5P52756 815 aaKnown RBP eCLIP17.36■□□□□ 0.37
SENP3-208ENST00000583277 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
SENP3-208ENST00000583277 RALYLQ86SE5 291 aaKnown RBP17.36■□□□□ 0.37
SENP3-208ENST00000583277 TBC1D10CQ8IV04 446 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 TGFBRAP1Q8WUH2 860 aa17.36■□□□□ 0.37
SENP3-208ENST00000583277 TTC14Q96N46 770 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms