RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ZBED3Q96IU2 234 aaPredicted RBP15.12■□□□□ 0.01
SRSF1-204ENST00000581979 ZNF512BQ96KM6 892 aaPredicted RBP15.12■□□□□ 0.01
SRSF1-204ENST00000581979 SNRKQ9NRH2 765 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 AKAP11Q9UKA4 1901 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 RAD50Q92878 1312 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 FAM155AB1AL88 458 aaPredicted RBP15.12■□□□□ 0.01
SRSF1-204ENST00000581979 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
SRSF1-204ENST00000581979 PHKA1P46020 1223 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 FKBP1AP62942 108 aaKnown RBP15.12■□□□□ 0.01
SRSF1-204ENST00000581979 UBE4AQ14139 1066 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 KIAA0825Q8IV33 1275 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 FAM227BQ96M60 508 aa15.12■□□□□ 0.01
SRSF1-204ENST00000581979 EPB41L2O43491 1005 aaKnown RBP15.11■□□□□ 0.01
SRSF1-204ENST00000581979 CA12O43570 354 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 MCAMP43121 646 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 ZAP70P43403 619 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 FKBP1BP68106 108 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 BECN1Q14457 450 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 CERS5Q8N5B7 392 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 CCDC102AQ96A19 550 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 ANTXR1Q9H6X2 564 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 MYH7P12883 1935 aa15.11■□□□□ 0.01
SRSF1-204ENST00000581979 LRRFIP1Q32MZ4 808 aaKnown RBP15.1■□□□□ 0.01
SRSF1-204ENST00000581979 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
SRSF1-204ENST00000581979 PAPPA2Q9BXP8 1791 aa15.09■□□□□ 0.01
SRSF1-204ENST00000581979 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
SRSF1-204ENST00000581979 TICAM2Q86XR7 235 aa15.09■□□□□ 0.01
SRSF1-204ENST00000581979 ZIC5Q96T25 663 aa15.09■□□□□ 0.01
SRSF1-204ENST00000581979 ZNF157P51786 506 aaPredicted RBP15.09■□□□□ 0.01
SRSF1-204ENST00000581979 TTF1Q15361 905 aaPredicted RBP15.09■□□□□ 0.01
SRSF1-204ENST00000581979 PI16Q6UXB8 463 aa15.09■□□□□ 0.01
SRSF1-204ENST00000581979 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
SRSF1-204ENST00000581979 KIF2CQ99661 725 aa15.09■□□□□ 0.01
SRSF1-204ENST00000581979 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
SRSF1-204ENST00000581979 SCAF8Q9UPN6 1271 aaKnown RBP15.09■□□□□ 0.01
SRSF1-204ENST00000581979 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
SRSF1-204ENST00000581979 SLC10A3P09131 477 aa15.08■□□□□ 0
SRSF1-204ENST00000581979 BCAMP50895 628 aa15.08■□□□□ 0
SRSF1-204ENST00000581979 CAVIN4Q5BKX8 364 aa15.08■□□□□ 0
SRSF1-204ENST00000581979 FAM205AQ6ZU69 1335 aa15.08■□□□□ 0
SRSF1-204ENST00000581979 APOBEC3FQ8IUX4 373 aaKnown RBP15.08■□□□□ 0
SRSF1-204ENST00000581979 FAM84BQ96KN1 310 aaPredicted RBP15.08■□□□□ 0
SRSF1-204ENST00000581979 HIBADHP31937 336 aaKnown RBP15.07■□□□□ 0
SRSF1-204ENST00000581979 DLGAP5Q15398 846 aa15.07■□□□□ 0
SRSF1-204ENST00000581979 MCMDC2Q4G0Z9 681 aa15.07■□□□□ 0
SRSF1-204ENST00000581979 SPATA5Q8NB90 893 aa15.07■□□□□ 0
SRSF1-204ENST00000581979 GNL3LQ9NVN8 582 aaKnown RBP15.07■□□□□ 0
SRSF1-204ENST00000581979 HMG20BQ9P0W2 317 aa15.07■□□□□ 0
SRSF1-204ENST00000581979 MYH13Q9UKX3 1938 aa15.07■□□□□ 0
SRSF1-204ENST00000581979 CCDC171Q6TFL3 1326 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 CHGBP05060 677 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 CYP2E1P05181 493 aaPredicted RBP15.06■□□□□ 0
SRSF1-204ENST00000581979 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
SRSF1-204ENST00000581979 HSPA4P34932 840 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 GYG1P46976 350 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 SLC4A3P48751 1232 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 RABEP1Q15276 862 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 PRAMEF18Q5VWM3 479 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 VPS37DQ86XT2 251 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 0
SRSF1-204ENST00000581979 HELLSQ9NRZ9 838 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
SRSF1-204ENST00000581979 DOCK2Q92608 1830 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
SRSF1-204ENST00000581979 PTH1RQ03431 593 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 RASGRF1Q13972 1273 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 FBXO33Q7Z6M2 555 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 HSCBQ8IWL3 235 aa15.06■□□□□ 0
SRSF1-204ENST00000581979 COL1A1P02452 1464 aaPredicted RBP15.05■□□□□ 0
SRSF1-204ENST00000581979 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 CAPN15O75808 1086 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 SPDYE6P0CI01 402 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 ANAPC15P60006 121 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 ZMYM1Q5SVZ6 1142 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 ZNF589Q86UQ0 364 aaPredicted RBP15.05■□□□□ -0
SRSF1-204ENST00000581979 RASAL3Q86YV0 1011 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 SEC62Q99442 399 aaKnown RBP15.05■□□□□ -0
SRSF1-204ENST00000581979 TBC1D2Q9BYX2 928 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 PIH1D3Q9NQM4 214 aaKnown RBP15.05■□□□□ -0
SRSF1-204ENST00000581979 TSKSQ9UJT2 592 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 JAG2Q9Y219 1238 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 ECM29Q5VYK3 1845 aa15.05■□□□□ -0
SRSF1-204ENST00000581979 F8W031 263 aaPredicted RBP15.04■□□□□ -0
SRSF1-204ENST00000581979 NF2P35240 595 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 CFAP100Q494V2 611 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 SLFNL1Q499Z3 407 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 MFSD14BQ5SR56 506 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 MOB2Q70IA6 237 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
SRSF1-204ENST00000581979 SAGE1Q9NXZ1 904 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 PALD1Q9ULE6 856 aa15.04■□□□□ -0
SRSF1-204ENST00000581979 IDH1O75874 414 aaKnown RBP15.03■□□□□ -0
SRSF1-204ENST00000581979 ERICH6Q7L0X2 663 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 SNX21Q969T3 373 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 PRMT6Q96LA8 375 aaPredicted RBP15.03■□□□□ -0
SRSF1-204ENST00000581979 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
SRSF1-204ENST00000581979 IQSEC3Q9UPP2 1182 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms