RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 GPR37L1O60883 481 aa12.32□□□□□ -0.44
CTC1-208ENST00000581671 PPATQ06203 517 aa12.32□□□□□ -0.44
CTC1-208ENST00000581671 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
CTC1-208ENST00000581671 MAST2Q6P0Q8 1798 aa12.32□□□□□ -0.44
CTC1-208ENST00000581671 TCP10L2B9ZVM9 353 aa12.31□□□□□ -0.44
CTC1-208ENST00000581671 BMP1P13497 986 aa12.31□□□□□ -0.44
CTC1-208ENST00000581671 COA7Q96BR5 231 aa12.31□□□□□ -0.44
CTC1-208ENST00000581671 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
CTC1-208ENST00000581671 KCNH4Q9UQ05 1017 aa12.31□□□□□ -0.44
CTC1-208ENST00000581671 SPEF2Q9C093 1822 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 FAM86C2PA6NEL3 165 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 WDFY4Q6ZS81 3184 aa12.3□□□□□ -0.44
CTC1-208ENST00000581671 TRIM28Q13263 835 aaKnown RBP12.29□□□□□ -0.44
CTC1-208ENST00000581671 RIC3Q7Z5B4 369 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 GAS2L1Q99501 681 aaPredicted RBP12.29□□□□□ -0.44
CTC1-208ENST00000581671 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 BSDC1Q9NW68 430 aaPredicted RBP12.29□□□□□ -0.44
CTC1-208ENST00000581671 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 SPTBN4Q9H254 2564 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 CFAP54Q96N23 3096 aa12.29□□□□□ -0.44
CTC1-208ENST00000581671 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
CTC1-208ENST00000581671 TNNI2P48788 182 aa12.28□□□□□ -0.44
CTC1-208ENST00000581671 NHLH1Q02575 133 aa12.28□□□□□ -0.44
CTC1-208ENST00000581671 CCDC85BQ15834 202 aaPredicted RBP12.28□□□□□ -0.44
CTC1-208ENST00000581671 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
CTC1-208ENST00000581671 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
CTC1-208ENST00000581671 REV3LO60673 3130 aa12.27□□□□□ -0.44
CTC1-208ENST00000581671 SMIM22K7EJ46 135 aa12.27□□□□□ -0.45
CTC1-208ENST00000581671 PDE8AO60658 829 aa12.27□□□□□ -0.45
CTC1-208ENST00000581671 DNAJB2P25686 324 aa12.27□□□□□ -0.45
CTC1-208ENST00000581671 USP34Q70CQ2 3546 aa12.26□□□□□ -0.45
CTC1-208ENST00000581671 INPP5BP32019 993 aa12.26□□□□□ -0.45
CTC1-208ENST00000581671 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
CTC1-208ENST00000581671 MAP3K21Q5TCX8 1036 aa12.26□□□□□ -0.45
CTC1-208ENST00000581671 BADQ92934 168 aa12.26□□□□□ -0.45
CTC1-208ENST00000581671 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
CTC1-208ENST00000581671 CXXC1Q9P0U4 656 aaPredicted RBP12.26□□□□□ -0.45
CTC1-208ENST00000581671 JAG2Q9Y219 1238 aa12.26□□□□□ -0.45
CTC1-208ENST00000581671 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
CTC1-208ENST00000581671 ATN1P54259 1190 aaPredicted RBP12.25□□□□□ -0.45
CTC1-208ENST00000581671 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
CTC1-208ENST00000581671 FOXK2Q01167 660 aa12.25□□□□□ -0.45
CTC1-208ENST00000581671 LHX8Q68G74 356 aa12.25□□□□□ -0.45
CTC1-208ENST00000581671 DZIP1LQ8IYY4 767 aaKnown RBP12.25□□□□□ -0.45
CTC1-208ENST00000581671 TRIB2Q92519 343 aa12.25□□□□□ -0.45
CTC1-208ENST00000581671 JARID2Q92833 1246 aaPredicted RBP12.25□□□□□ -0.45
CTC1-208ENST00000581671 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTC1-208ENST00000581671 RNPC3Q96LT9 517 aaKnown RBP12.25□□□□□ -0.45
CTC1-208ENST00000581671 GJD2Q9UKL4 321 aa12.25□□□□□ -0.45
CTC1-208ENST00000581671 KCNQ1P51787 676 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 TFF2Q03403 129 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 ADGRE1Q14246 886 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 CHD9Q3L8U1 2897 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 SMCR8Q8TEV9 937 aaPredicted RBP12.24□□□□□ -0.45
CTC1-208ENST00000581671 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 SERPINA10Q9UK55 444 aa12.24□□□□□ -0.45
CTC1-208ENST00000581671 RTP1P59025 263 aa12.23□□□□□ -0.45
CTC1-208ENST00000581671 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
CTC1-208ENST00000581671 TIFAQ96CG3 184 aa12.23□□□□□ -0.45
CTC1-208ENST00000581671 CHPF2Q9P2E5 772 aa12.23□□□□□ -0.45
CTC1-208ENST00000581671 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
CTC1-208ENST00000581671 CXCL11O14625 94 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 PCCAP05165 728 aaPredicted RBP12.22□□□□□ -0.45
CTC1-208ENST00000581671 CACNB3P54284 484 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 RALBP1Q15311 655 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 DCAF15Q66K64 600 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 HOOK2Q96ED9 719 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 ZNF341Q9BYN7 854 aa12.22□□□□□ -0.45
CTC1-208ENST00000581671 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
CTC1-208ENST00000581671 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
CTC1-208ENST00000581671 TTF2Q9UNY4 1162 aaKnown RBP12.22□□□□□ -0.45
CTC1-208ENST00000581671 FRMPD3Q5JV73 1810 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.21□□□□□ -0.45
CTC1-208ENST00000581671 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.21□□□□□ -0.45
CTC1-208ENST00000581671 IL1R1P14778 569 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 IGFBP4P22692 258 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 KCNJ4P48050 445 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 AAK1Q2M2I8 961 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 FASTKD5Q7L8L6 764 aaKnown RBP12.21□□□□□ -0.45
CTC1-208ENST00000581671 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 PNNQ9H307 717 aaKnown RBP12.21□□□□□ -0.45
CTC1-208ENST00000581671 GREM2Q9H772 168 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 ATP11BQ9Y2G3 1177 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 SLC45A1Q9Y2W3 748 aa12.21□□□□□ -0.45
CTC1-208ENST00000581671 CHD7Q9P2D1 2997 aa12.2□□□□□ -0.46
CTC1-208ENST00000581671 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
CTC1-208ENST00000581671 PRR33A8MZF0 331 aa12.2□□□□□ -0.46
CTC1-208ENST00000581671 SNAP23O00161 211 aa12.2□□□□□ -0.46
CTC1-208ENST00000581671 CCND3P30281 292 aaPredicted RBP12.2□□□□□ -0.46
CTC1-208ENST00000581671 EPHB4P54760 987 aa12.2□□□□□ -0.46
CTC1-208ENST00000581671 CTSWP56202 376 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms