RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CARMIL2Q6F5E8 1435 aa7.52□□□□□ -1.21
SMCHD1-206ENST00000581631 ICMTO60725 284 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 ABL1P00519 1130 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 IGHA2P01877 340 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 PRPF40BQ6NWY9 871 aaKnown RBP7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 CCDC82Q8N4S0 544 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 SLC5A6Q9Y289 635 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 PCDHGC5Q9Y5F6 944 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 U3KQE9 123 aa7.51□□□□□ -1.21
SMCHD1-206ENST00000581631 FAM129BQ96TA1 746 aa7.5□□□□□ -1.21
SMCHD1-206ENST00000581631 NPHS2Q9NP85 383 aa7.5□□□□□ -1.21
SMCHD1-206ENST00000581631 RAD18Q9NS91 495 aa7.5□□□□□ -1.21
SMCHD1-206ENST00000581631 CRIM1Q9NZV1 1036 aa7.5□□□□□ -1.21
SMCHD1-206ENST00000581631 DAGLAQ9Y4D2 1042 aa7.5□□□□□ -1.21
SMCHD1-206ENST00000581631 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
SMCHD1-206ENST00000581631 ZNF792Q3KQV3 632 aa7.49□□□□□ -1.21
SMCHD1-206ENST00000581631 STK11IPQ8N1F8 1099 aa7.49□□□□□ -1.21
SMCHD1-206ENST00000581631 WDR89Q96FK6 387 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-206ENST00000581631 FAAP100Q0VG06 881 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 AP3B2Q13367 1082 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 ORC1Q13415 861 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 GLIS3Q8NEA6 775 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 DDX54Q8TDD1 881 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 MISP3Q96FF7 219 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 KRTAP4-9Q9BYQ8 210 aa7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 CCDC86Q9H6F5 360 aaKnown RBP7.48□□□□□ -1.21
SMCHD1-206ENST00000581631 ZNF862O60290 1169 aa7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 BNIP3Q12983 259 aa7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 RPS26P11Q5JNZ5 115 aaPredicted RBP7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 EHD4Q9H223 541 aa7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 C1orf115Q9H7X2 142 aa7.47□□□□□ -1.21
SMCHD1-206ENST00000581631 CPNE3O75131 537 aaKnown RBP7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 LIG1P18858 919 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 FUT4P22083 530 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 CDK5R2Q13319 367 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 PDE3AQ14432 1141 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 PLCL1Q15111 1095 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 KIF4BQ2VIQ3 1234 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 LGR6Q9HBX8 967 aa7.46□□□□□ -1.22
SMCHD1-206ENST00000581631 FAM87AP0C7U9 286 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 CD8BP10966 210 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 CYP27C1Q4G0S4 372 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 NETO1Q8TDF5 533 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 DISC1Q9NRI5 854 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 ADAMTS6Q9UKP5 1117 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 BRPF3Q9ULD4 1205 aa7.45□□□□□ -1.22
SMCHD1-206ENST00000581631 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 GPR182O15218 404 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 NEFLP07196 543 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 RNASE1P07998 156 aaKnown RBP7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 SERPINB4P48594 390 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 ATG4DQ86TL0 474 aaPredicted RBP7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 PDZD3Q86UT5 571 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 FAM181AQ8N9Y4 354 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 CCDC74AQ96AQ1 378 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 KRT82Q9NSB4 513 aa7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 MBNL3Q9NUK0 354 aaKnown RBP7.44□□□□□ -1.22
SMCHD1-206ENST00000581631 H3BRB1 525 aa7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 ID3Q02535 119 aa7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 ZNF648Q5T619 568 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 DNAJC25Q9H1X3 360 aa7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 TUT1Q9H6E5 874 aaKnown RBP7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 MKNK2Q9HBH9 465 aa7.43□□□□□ -1.22
SMCHD1-206ENST00000581631 BIN1O00499 593 aa7.42□□□□□ -1.22
SMCHD1-206ENST00000581631 PRKCQQ04759 706 aa7.42□□□□□ -1.22
SMCHD1-206ENST00000581631 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
SMCHD1-206ENST00000581631 PLAGL2Q9UPG8 496 aa7.42□□□□□ -1.22
SMCHD1-206ENST00000581631 EIF1AYO14602 144 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 LEFTY1O75610 366 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 NEFMP07197 916 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 GSTP1P09211 210 aaKnown RBP7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 CD96P40200 585 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 OXCT1P55809 520 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 GRM2Q14416 872 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 TTLL4Q14679 1199 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 GLYCTKQ8IVS8 523 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 CITED4Q96RK1 184 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 USTQ9Y2C2 406 aa7.41□□□□□ -1.22
SMCHD1-206ENST00000581631 NDUFB5O43674 189 aa7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 ZNF157P51786 506 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 LRRN4CLQ8ND94 238 aa7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 DUSP23Q9BVJ7 150 aa7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
SMCHD1-206ENST00000581631 CEACAM5P06731 702 aa7.39□□□□□ -1.23
SMCHD1-206ENST00000581631 IFI16Q16666 785 aaKnown RBP7.39□□□□□ -1.23
SMCHD1-206ENST00000581631 FAM214BQ7L5A3 538 aa7.39□□□□□ -1.23
SMCHD1-206ENST00000581631 FAM168AQ92567 244 aa7.39□□□□□ -1.23
SMCHD1-206ENST00000581631 TNKS2Q9H2K2 1166 aa7.39□□□□□ -1.23
SMCHD1-206ENST00000581631 PIDD1Q9HB75 910 aa7.39□□□□□ -1.23
SMCHD1-206ENST00000581631 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
SMCHD1-206ENST00000581631 ZNF124Q15973 351 aa7.38□□□□□ -1.23
SMCHD1-206ENST00000581631 SPOCD1Q6ZMY3 1216 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms