RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 IGF2BP3O00425 579 aaKnown RBP eCLIP15.48■□□□□ 0.07
SENP3-204ENST00000580997 GNAI2P04899 355 aa15.48■□□□□ 0.07
SENP3-204ENST00000580997 PRDX5P30044 214 aa15.48■□□□□ 0.07
SENP3-204ENST00000580997 TIMM10P62072 90 aa15.48■□□□□ 0.07
SENP3-204ENST00000580997 CCDC102BQ68D86 513 aa15.48■□□□□ 0.07
SENP3-204ENST00000580997 TMOD2Q9NZR1 351 aa15.48■□□□□ 0.07
SENP3-204ENST00000580997 LAMB1P07942 1786 aa15.48■□□□□ 0.07
SENP3-204ENST00000580997 PDS5AQ29RF7 1337 aaKnown RBP15.47■□□□□ 0.07
SENP3-204ENST00000580997 LDHBP07195 334 aaKnown RBP15.47■□□□□ 0.07
SENP3-204ENST00000580997 ADORA1P30542 326 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 HNRNPUQ00839 825 aaKnown RBP eCLIP15.47■□□□□ 0.07
SENP3-204ENST00000580997 VGLL4Q14135 290 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 ZKSCAN2Q63HK3 967 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 OPTNQ96CV9 577 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 HOOK2Q96ED9 719 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 MS4A4AQ96JQ5 239 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 PTPN18Q99952 460 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 ELP3Q9H9T3 547 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 AKAP2Q9Y2D5 859 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
SENP3-204ENST00000580997 FKTNO75072 461 aa15.46■□□□□ 0.07
SENP3-204ENST00000580997 TFCP2Q12800 502 aa15.46■□□□□ 0.07
SENP3-204ENST00000580997 DIXDC1Q155Q3 683 aa15.46■□□□□ 0.07
SENP3-204ENST00000580997 FAM151AQ8WW52 585 aa15.46■□□□□ 0.07
SENP3-204ENST00000580997 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
SENP3-204ENST00000580997 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
SENP3-204ENST00000580997 A0A1B0GUL7 405 aa15.45■□□□□ 0.06
SENP3-204ENST00000580997 RASGRF1Q13972 1273 aa15.45■□□□□ 0.06
SENP3-204ENST00000580997 OTUD7BQ6GQQ9 843 aa15.45■□□□□ 0.06
SENP3-204ENST00000580997 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
SENP3-204ENST00000580997 ZGPATQ8N5A5 531 aaKnown RBP15.45■□□□□ 0.06
SENP3-204ENST00000580997 TMEM57Q8N5G2 664 aa15.45■□□□□ 0.06
SENP3-204ENST00000580997 FAM163AQ96GL9 167 aaPredicted RBP15.45■□□□□ 0.06
SENP3-204ENST00000580997 XAGE2Q96GT9 111 aa15.45■□□□□ 0.06
SENP3-204ENST00000580997 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
SENP3-204ENST00000580997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
SENP3-204ENST00000580997 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
SENP3-204ENST00000580997 MLLT1Q03111 559 aaPredicted RBP15.44■□□□□ 0.06
SENP3-204ENST00000580997 MVPQ14764 893 aaKnown RBP15.44■□□□□ 0.06
SENP3-204ENST00000580997 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
SENP3-204ENST00000580997 CSADQ9Y600 493 aa15.44■□□□□ 0.06
SENP3-204ENST00000580997 SNCAIPQ9Y6H5 919 aa15.44■□□□□ 0.06
SENP3-204ENST00000580997 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 GTF2A2P52657 109 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 NFIAQ12857 509 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 USP40Q9NVE5 1235 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 FAM198AQ9UFP1 575 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 ZNF112Q9UJU3 913 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 OTOFQ9HC10 1997 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 HTTP42858 3142 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 GAKO14976 1311 aa15.43■□□□□ 0.06
SENP3-204ENST00000580997 CRHR2Q13324 411 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 FBXO46Q6PJ61 603 aaPredicted RBP15.42■□□□□ 0.06
SENP3-204ENST00000580997 ERO1BQ86YB8 467 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 SSH3Q8TE77 659 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 BRI3BPQ8WY22 251 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
SENP3-204ENST00000580997 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 IDI2Q9BXS1 227 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 ZBED9Q6R2W3 1325 aa15.42■□□□□ 0.06
SENP3-204ENST00000580997 MYH13Q9UKX3 1938 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 TNRC18O15417 2968 aaPredicted RBP15.41■□□□□ 0.06
SENP3-204ENST00000580997 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 ZBTB7BO15156 539 aaPredicted RBP15.41■□□□□ 0.06
SENP3-204ENST00000580997 ATP8B2P98198 1209 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 G3BP1Q13283 466 aaKnown RBP eCLIP15.41■□□□□ 0.06
SENP3-204ENST00000580997 SPTY2D1Q68D10 685 aaPredicted RBP15.41■□□□□ 0.06
SENP3-204ENST00000580997 MIGA2Q7L4E1 593 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 ZNF341Q9BYN7 854 aa15.41■□□□□ 0.06
SENP3-204ENST00000580997 CCL15-CCL14A0A0B4J2E2 113 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
SENP3-204ENST00000580997 PPATQ06203 517 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 TCP10Q12799 353 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 CCL15Q16663 113 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 ZFPM1Q8IX07 1006 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 HMG20BQ9P0W2 317 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
SENP3-204ENST00000580997 IRF6O14896 467 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 ENTPD3O75355 529 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 CETPP11597 493 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 MAP3K10Q02779 954 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 MECOMQ03112 1051 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 PPIL2Q13356 520 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 OTOP1Q7RTM1 612 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 DZIP1Q86YF9 867 aaKnown RBP15.39■□□□□ 0.05
SENP3-204ENST00000580997 FAM43AQ8N2R8 423 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 ZNF384Q8TF68 577 aa15.39■□□□□ 0.05
SENP3-204ENST00000580997 ZCCHC17Q9NP64 241 aaKnown RBP15.39■□□□□ 0.05
SENP3-204ENST00000580997 RFX7Q2KHR2 1363 aa15.38■□□□□ 0.05
SENP3-204ENST00000580997 ATRNL1Q5VV63 1379 aa15.38■□□□□ 0.05
SENP3-204ENST00000580997 CENPFP49454 3210 aa15.38■□□□□ 0.05
SENP3-204ENST00000580997 GPR75-ASB3A0A0A6YYF3 556 aa15.38■□□□□ 0.05
SENP3-204ENST00000580997 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
SENP3-204ENST00000580997 RLBP1P12271 317 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms