RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
TOP3A-210ENST00000580713 WRNIP1Q96S55 665 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 STAP2Q9UGK3 403 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.22
TOP3A-210ENST00000580713 CTGFP29279 349 aa13.64□□□□□ -0.23
TOP3A-210ENST00000580713 CRKP46108 304 aa13.64□□□□□ -0.23
TOP3A-210ENST00000580713 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
TOP3A-210ENST00000580713 GCKRQ14397 625 aa13.64□□□□□ -0.23
TOP3A-210ENST00000580713 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
TOP3A-210ENST00000580713 U2AF1L4Q8WU68 220 aaKnown RBP13.64□□□□□ -0.23
TOP3A-210ENST00000580713 PPIL2Q13356 520 aa13.63□□□□□ -0.23
TOP3A-210ENST00000580713 TAF7LQ5H9L4 462 aa13.63□□□□□ -0.23
TOP3A-210ENST00000580713 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
TOP3A-210ENST00000580713 MYH16Q9H6N6 1097 aa13.63□□□□□ -0.23
TOP3A-210ENST00000580713 FAM205AQ6ZU69 1335 aa13.63□□□□□ -0.23
TOP3A-210ENST00000580713 PDHXO00330 501 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 TFRCP02786 760 aaKnown RBP13.62□□□□□ -0.23
TOP3A-210ENST00000580713 CACNB3P54284 484 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.62□□□□□ -0.23
TOP3A-210ENST00000580713 HOOK2Q96ED9 719 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 YTHDC1Q96MU7 727 aaKnown RBP13.62□□□□□ -0.23
TOP3A-210ENST00000580713 UNC93B1Q9H1C4 597 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 CNNM1Q9NRU3 951 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 TMOD2Q9NZR1 351 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 COL6A3P12111 3177 aa13.62□□□□□ -0.23
TOP3A-210ENST00000580713 SGPL1O95470 568 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 HIBADHP31937 336 aaKnown RBP13.61□□□□□ -0.23
TOP3A-210ENST00000580713 CASP7P55210 303 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 FCGRTP55899 365 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 PRKCZQ05513 592 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 G2E3Q7L622 706 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 ANKRD23Q86SG2 305 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 SLAIN1Q8ND83 568 aa13.61□□□□□ -0.23
TOP3A-210ENST00000580713 APAF1O14727 1248 aa13.6□□□□□ -0.23
TOP3A-210ENST00000580713 GYG1P46976 350 aa13.6□□□□□ -0.23
TOP3A-210ENST00000580713 PPATQ06203 517 aa13.6□□□□□ -0.23
TOP3A-210ENST00000580713 DCAF15Q66K64 600 aa13.6□□□□□ -0.23
TOP3A-210ENST00000580713 LDHAL6AQ6ZMR3 332 aa13.6□□□□□ -0.23
TOP3A-210ENST00000580713 TDRD7Q8NHU6 1098 aaKnown RBP13.6□□□□□ -0.23
TOP3A-210ENST00000580713 ZNF594Q96JF6 807 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-210ENST00000580713 ADCY3O60266 1144 aa13.59□□□□□ -0.23
TOP3A-210ENST00000580713 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-210ENST00000580713 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-210ENST00000580713 CCDC57Q2TAC2 916 aa13.59□□□□□ -0.23
TOP3A-210ENST00000580713 Q7L0L9 218 aa13.59□□□□□ -0.23
TOP3A-210ENST00000580713 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
TOP3A-210ENST00000580713 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
TOP3A-210ENST00000580713 GABRQQ9UN88 632 aa13.59□□□□□ -0.23
TOP3A-210ENST00000580713 INPP5BP32019 993 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-210ENST00000580713 LMBR1LQ6UX01 489 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 MIGA2Q7L4E1 593 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 TEKT1Q969V4 418 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 DEFB118Q96PH6 123 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 PARK7Q99497 189 aaKnown RBP13.58□□□□□ -0.24
TOP3A-210ENST00000580713 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
TOP3A-210ENST00000580713 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-210ENST00000580713 INHAP05111 366 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 ELNP15502 786 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 FOXO4P98177 505 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 FLIIQ13045 1269 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 UBE4AQ14139 1066 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 GRIK5Q16478 980 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 C7orf61Q8IZ16 206 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 TSR2Q969E8 191 aaKnown RBP13.57□□□□□ -0.24
TOP3A-210ENST00000580713 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
TOP3A-210ENST00000580713 FAM84BQ96KN1 310 aaPredicted RBP13.57□□□□□ -0.24
TOP3A-210ENST00000580713 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
TOP3A-210ENST00000580713 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 ADGRA2Q96PE1 1338 aa13.57□□□□□ -0.24
TOP3A-210ENST00000580713 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 CYP2C8P10632 490 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 FLT3LGP49771 235 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
TOP3A-210ENST00000580713 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
TOP3A-210ENST00000580713 GPR153Q6NV75 609 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 NECAB2Q7Z6G3 386 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 FAM83AQ86UY5 434 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 GDF15Q99988 308 aa13.56□□□□□ -0.24
TOP3A-210ENST00000580713 BCRP11274 1271 aa13.55□□□□□ -0.24
TOP3A-210ENST00000580713 CAPN2P17655 700 aa13.55□□□□□ -0.24
TOP3A-210ENST00000580713 BMP8BP34820 402 aa13.55□□□□□ -0.24
TOP3A-210ENST00000580713 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
TOP3A-210ENST00000580713 COL25A1Q9BXS0 654 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-210ENST00000580713 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
TOP3A-210ENST00000580713 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
TOP3A-210ENST00000580713 TNPO2O14787 897 aaKnown RBP13.54□□□□□ -0.24
TOP3A-210ENST00000580713 BCAMP50895 628 aa13.54□□□□□ -0.24
TOP3A-210ENST00000580713 FKBP1CQ5VVH2 108 aa13.54□□□□□ -0.24
TOP3A-210ENST00000580713 ZDHHC15Q96MV8 337 aa13.54□□□□□ -0.24
TOP3A-210ENST00000580713 SYN1P17600 705 aa13.53□□□□□ -0.24
TOP3A-210ENST00000580713 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
TOP3A-210ENST00000580713 TCP10Q12799 353 aa13.53□□□□□ -0.24
TOP3A-210ENST00000580713 MOGSQ13724 837 aa13.53□□□□□ -0.24
TOP3A-210ENST00000580713 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
TOP3A-210ENST00000580713 PXYLP1Q8TE99 480 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms