RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 RBM19Q9Y4C8 960 aaKnown RBP16.59■□□□□ 0.25
TSEN54-206ENST00000579449 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
TSEN54-206ENST00000579449 GSG1L2A8MUP6 293 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 APPP05067 770 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 CRKP46108 304 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 HDLBPQ00341 1268 aaKnown RBP16.58■□□□□ 0.24
TSEN54-206ENST00000579449 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 TEKT1Q969V4 418 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 RNF181Q9P0P0 153 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 BAZ2AQ9UIF9 1905 aaKnown RBP16.58■□□□□ 0.24
TSEN54-206ENST00000579449 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.24
TSEN54-206ENST00000579449 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
TSEN54-206ENST00000579449 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 FGAP02671 866 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 ALX1Q15699 326 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 SH3RF3Q8TEJ3 882 aaPredicted RBP16.57■□□□□ 0.24
TSEN54-206ENST00000579449 CRNKL1Q9BZJ0 848 aaKnown RBP16.57■□□□□ 0.24
TSEN54-206ENST00000579449 SERPINA10Q9UK55 444 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 PALD1Q9ULE6 856 aa16.57■□□□□ 0.24
TSEN54-206ENST00000579449 SLC27A2O14975 620 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 PLCG2P16885 1265 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 C9orf131Q5VYM1 1079 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 CERS3Q8IU89 383 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 IFNL3Q8IZI9 196 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 KCNB2Q92953 911 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 ZDHHC15Q96MV8 337 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 EPB41L4AQ9HCS5 686 aaPredicted RBP16.56■□□□□ 0.24
TSEN54-206ENST00000579449 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 PCDHAC2Q9Y5I4 1007 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
TSEN54-206ENST00000579449 LAMA4Q16363 1823 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 FOCADQ5VW36 1801 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 RPS12P25398 132 aaKnown RBP16.55■□□□□ 0.24
TSEN54-206ENST00000579449 RBM5P52756 815 aaKnown RBP eCLIP16.55■□□□□ 0.24
TSEN54-206ENST00000579449 RHBDL3P58872 404 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 APOBEC3HQ6NTF7 200 aaKnown RBP16.55■□□□□ 0.24
TSEN54-206ENST00000579449 RASEFQ8IZ41 740 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 KIF2CQ99661 725 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
TSEN54-206ENST00000579449 NAV1Q8NEY1 1877 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 USP5P45974 858 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 GMPSP49915 693 aaPredicted RBP16.54■□□□□ 0.24
TSEN54-206ENST00000579449 ANAPC15P60006 121 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 RNF20Q5VTR2 975 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 TEX11Q8IYF3 940 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 OGFOD1Q8N543 542 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 NAPBQ9H115 298 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
TSEN54-206ENST00000579449 MYH1P12882 1939 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 CYP21A2P08686 494 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 TDO2P48775 406 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 CDC42EP5Q6NZY7 148 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 TGFBRAP1Q8WUH2 860 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 DCP1AQ9NPI6 582 aaPredicted RBP16.53■□□□□ 0.24
TSEN54-206ENST00000579449 USP40Q9NVE5 1235 aa16.53■□□□□ 0.24
TSEN54-206ENST00000579449 SHTN1A0MZ66 631 aa16.52■□□□□ 0.24
TSEN54-206ENST00000579449 ZKSCAN1P17029 563 aaPredicted RBP16.52■□□□□ 0.24
TSEN54-206ENST00000579449 HAND2P61296 217 aa16.52■□□□□ 0.24
TSEN54-206ENST00000579449 IMMTQ16891 758 aaKnown RBP16.52■□□□□ 0.24
TSEN54-206ENST00000579449 DPF2Q92785 391 aa16.52■□□□□ 0.24
TSEN54-206ENST00000579449 IL17RAQ96F46 866 aa16.52■□□□□ 0.24
TSEN54-206ENST00000579449 TAF6LQ9Y6J9 622 aa16.52■□□□□ 0.24
TSEN54-206ENST00000579449 LAMB1P07942 1786 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 ZNF213O14771 459 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 MMP14P50281 582 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 ZNF280AP59817 542 aaPredicted RBP16.51■□□□□ 0.23
TSEN54-206ENST00000579449 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 GPC2Q8N158 579 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
TSEN54-206ENST00000579449 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
TSEN54-206ENST00000579449 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
TSEN54-206ENST00000579449 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 MICALL2Q8IY33 904 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 MTMR14Q8NCE2 650 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
TSEN54-206ENST00000579449 MYOZ2Q9NPC6 264 aa16.5■□□□□ 0.23
TSEN54-206ENST00000579449 CNOT7Q9UIV1 285 aaKnown RBP16.5■□□□□ 0.23
TSEN54-206ENST00000579449 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
TSEN54-206ENST00000579449 FLT1P17948 1338 aa16.49■□□□□ 0.23
TSEN54-206ENST00000579449 USP17L12C9JPN9 530 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms