RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 PTPN18Q99952 460 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 COPRSQ9NQ92 184 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 DAGLAQ9Y4D2 1042 aa11.42□□□□□ -0.58
CDK5RAP3-211ENST00000578996 A0A1B0GUL7 405 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 SEMA3EO15041 775 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 GNAI2P04899 355 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TFCP2Q12800 502 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 FKBP1CQ5VVH2 108 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 CDC42EP5Q6NZY7 148 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ATF7IPQ6VMQ6 1270 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 DZIP1Q86YF9 867 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ERO1AQ96HE7 468 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 NEUROD6Q96NK8 337 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 USP40Q9NVE5 1235 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ABCF2Q9UG63 623 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 AKAP2Q9Y2D5 859 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 SNCAIPQ9Y6H5 919 aa11.41□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 SP3Q02447 781 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 NFIAQ12857 509 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 RASGRF1Q13972 1273 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 GORABQ5T7V8 394 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 OTOP1Q7RTM1 612 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ZGPATQ8N5A5 531 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 FAM151AQ8WW52 585 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 BRI3BPQ8WY22 251 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ZNF341Q9BYN7 854 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 ZFYVE28Q9HCC9 887 aa11.4□□□□□ -0.58
CDK5RAP3-211ENST00000578996 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.59
CDK5RAP3-211ENST00000578996 SALL1Q9NSC2 1324 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 WDHD1O75717 1129 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 INPP5BP32019 993 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 MVPQ14764 893 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ZSCAN29Q8IWY8 852 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 MIER1Q8N108 512 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 FAM43AQ8N2R8 423 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 XAGE2Q96GT9 111 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 LAMB1P07942 1786 aa11.39□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PNMA6EA0A0J9YXQ4 647 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 IRF6O14896 467 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 CETPP11597 493 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PICALMQ13492 652 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 MTX1Q13505 466 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ZKSCAN2Q63HK3 967 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-211ENST00000578996 BTDP43251 543 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 RGS3P49796 1198 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PPIL2Q13356 520 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ZFPM1Q8IX07 1006 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PTPN22Q9Y2R2 807 aa11.37□□□□□ -0.59
CDK5RAP3-211ENST00000578996 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
CDK5RAP3-211ENST00000578996 MECOMQ03112 1051 aa11.36□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PPATQ06203 517 aa11.36□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PI16Q6UXB8 463 aa11.36□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ITPRIPQ8IWB1 547 aa11.36□□□□□ -0.59
CDK5RAP3-211ENST00000578996 C1orf115Q9H7X2 142 aa11.36□□□□□ -0.59
CDK5RAP3-211ENST00000578996 MROH7-TTC4A0A0A0MT08 1334 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 GAKO14976 1311 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PDS5AQ29RF7 1337 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 KIF22Q14807 665 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ARHGEF6Q15052 776 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 TBC1D9Q6ZT07 1266 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 SPATA5Q8NB90 893 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 RAI14Q9P0K7 980 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 HMG20BQ9P0W2 317 aa11.35□□□□□ -0.59
CDK5RAP3-211ENST00000578996 TLR2O60603 784 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ENTPD3O75355 529 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 CAP1Q01518 475 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 IDI2Q9BXS1 227 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 DDX4Q9NQI0 724 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 PICK1Q9NRD5 415 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 ZNF112Q9UJU3 913 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 AK9Q5TCS8 1911 aa11.34□□□□□ -0.59
CDK5RAP3-211ENST00000578996 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 PDHXO00330 501 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 MYCP01106 439 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 SLURP2P0DP57 97 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 MCAMP43121 646 aa11.33□□□□□ -0.6
CDK5RAP3-211ENST00000578996 GSTO1P78417 241 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms