RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 CEP290O15078 2479 aa11.55□□□□□ -0.56
PTPRM-210ENST00000578916 RANBP2P49792 3224 aaKnown RBP11.54□□□□□ -0.56
PTPRM-210ENST00000578916 A0A1W2PPC1 479 aa11.54□□□□□ -0.56
PTPRM-210ENST00000578916 FCGRTP55899 365 aa11.54□□□□□ -0.56
PTPRM-210ENST00000578916 GRIK5Q16478 980 aa11.54□□□□□ -0.56
PTPRM-210ENST00000578916 MIGA2Q7L4E1 593 aa11.54□□□□□ -0.56
PTPRM-210ENST00000578916 U2AF1L4Q8WU68 220 aaKnown RBP11.54□□□□□ -0.56
PTPRM-210ENST00000578916 TBC1D22AQ8WUA7 517 aa11.54□□□□□ -0.56
PTPRM-210ENST00000578916 IQSEC3Q9UPP2 1182 aaPredicted RBP11.54□□□□□ -0.56
PTPRM-210ENST00000578916 F6X3S4 739 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 EVI5O60447 810 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 PRKCZQ05513 592 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 CAVIN4Q5BKX8 364 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 FKBP1CQ5VVH2 108 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 ZDHHC15Q96MV8 337 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 PARK7Q99497 189 aaKnown RBP11.53□□□□□ -0.56
PTPRM-210ENST00000578916 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
PTPRM-210ENST00000578916 ADGRA2Q96PE1 1338 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 ZSWIM8A7E2V4 1837 aa11.53□□□□□ -0.56
PTPRM-210ENST00000578916 GRM8O00222 908 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 SGPL1O95470 568 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 INPP5BP32019 993 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 FBXO33Q7Z6M2 555 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 MRIQ9BWK5 157 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.57
PTPRM-210ENST00000578916 UNC93B1Q9H1C4 597 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
PTPRM-210ENST00000578916 KCNH4Q9UQ05 1017 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 MAST3O60307 1309 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 MROH5Q6ZUA9 1318 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 ARAP2Q8WZ64 1704 aa11.52□□□□□ -0.57
PTPRM-210ENST00000578916 SOX1O00570 391 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-210ENST00000578916 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
PTPRM-210ENST00000578916 TFRCP02786 760 aaKnown RBP11.51□□□□□ -0.57
PTPRM-210ENST00000578916 CAPN2P17655 700 aa11.51□□□□□ -0.57
PTPRM-210ENST00000578916 CCDC27Q2M243 656 aa11.51□□□□□ -0.57
PTPRM-210ENST00000578916 APOBEC3HQ6NTF7 200 aaKnown RBP11.51□□□□□ -0.57
PTPRM-210ENST00000578916 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
PTPRM-210ENST00000578916 STAP2Q9UGK3 403 aa11.51□□□□□ -0.57
PTPRM-210ENST00000578916 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
PTPRM-210ENST00000578916 RPAP1Q9BWH6 1393 aaPredicted RBP11.51□□□□□ -0.57
PTPRM-210ENST00000578916 A0A1B0GUL6 1792 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 ADCY3O60266 1144 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 VAMP4O75379 141 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 CYP2C8P10632 490 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 BCRP11274 1271 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
PTPRM-210ENST00000578916 METTL24Q5JXM2 366 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 HHIPL2Q6UWX4 724 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 FAM151AQ8WW52 585 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 ZNF112Q9UJU3 913 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 SUGT1Q9Y2Z0 365 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 IL16Q14005 1332 aa11.5□□□□□ -0.57
PTPRM-210ENST00000578916 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 CXCL11O14625 94 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 ALDH1L1O75891 902 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 INHAP05111 366 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 BCAMP50895 628 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 MOGSQ13724 837 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
PTPRM-210ENST00000578916 COL6A3P12111 3177 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 ELNP15502 786 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 FLT3LGP49771 235 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 TCP10Q12799 353 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 NOL9Q5SY16 702 aaKnown RBP11.48□□□□□ -0.57
PTPRM-210ENST00000578916 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 FASTKD5Q7L8L6 764 aaKnown RBP11.48□□□□□ -0.57
PTPRM-210ENST00000578916 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 SUCLG2Q96I99 432 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 SRCIN1Q9C0H9 1055 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 FANCIQ9NVI1 1328 aa11.48□□□□□ -0.57
PTPRM-210ENST00000578916 TNPO2O14787 897 aaKnown RBP11.47□□□□□ -0.57
PTPRM-210ENST00000578916 PDE8BO95263 885 aa11.47□□□□□ -0.57
PTPRM-210ENST00000578916 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
PTPRM-210ENST00000578916 EXOSC9Q06265 439 aaKnown RBP11.47□□□□□ -0.57
PTPRM-210ENST00000578916 IRF5Q13568 498 aa11.47□□□□□ -0.57
PTPRM-210ENST00000578916 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
PTPRM-210ENST00000578916 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
PTPRM-210ENST00000578916 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
PTPRM-210ENST00000578916 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
PTPRM-210ENST00000578916 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.57
PTPRM-210ENST00000578916 BMP8BP34820 402 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 CDC42EP5Q6NZY7 148 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 GADL1Q6ZQY3 521 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 WDR66Q8TBY9 1149 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 SMCR8Q8TEV9 937 aaPredicted RBP11.46□□□□□ -0.57
PTPRM-210ENST00000578916 KAZALD1Q96I82 304 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 PAK6Q9NQU5 681 aaPredicted RBP11.46□□□□□ -0.57
PTPRM-210ENST00000578916 PICK1Q9NRD5 415 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
PTPRM-210ENST00000578916 A0A0G2JLL6 359 aaPredicted RBP11.45□□□□□ -0.58
PTPRM-210ENST00000578916 NFIAQ12857 509 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 PRRT2Q7Z6L0 340 aaPredicted RBP11.45□□□□□ -0.58
PTPRM-210ENST00000578916 C7orf61Q8IZ16 206 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms