RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 GRIK5Q16478 980 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 TSGA10IPQ3SY00 556 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 CREB3L3Q68CJ9 461 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 HHIPL2Q6UWX4 724 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 CRNKL1Q9BZJ0 848 aaKnown RBP16.02■□□□□ 0.16
SRSF1-202ENST00000578430 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
SRSF1-202ENST00000578430 TTF2Q9UNY4 1162 aaKnown RBP16.02■□□□□ 0.16
SRSF1-202ENST00000578430 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-202ENST00000578430 KRT32Q14532 448 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 RABEP1Q15276 862 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 IFFO2Q5TF58 517 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 VPS53Q5VIR6 699 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 RSBN1LQ6PCB5 846 aaPredicted RBP16.01■□□□□ 0.15
SRSF1-202ENST00000578430 ARHGAP27Q6ZUM4 889 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 AGBL3Q8NEM8 1001 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 DDRGK1Q96HY6 314 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 COL4A5P29400 1685 aa16.01■□□□□ 0.15
SRSF1-202ENST00000578430 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 SLC27A2O14975 620 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 FOXP2O15409 715 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 APPP05067 770 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 LMNB1P20700 586 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 RASSF7Q02833 373 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 CIAPIN1Q6FI81 312 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 TEKT1Q969V4 418 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 KIF2CQ99661 725 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 TM6SF1Q9BZW5 370 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 ATP8A2Q9NTI2 1148 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 SERPINA10Q9UK55 444 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 SNX14Q9Y5W7 946 aa16■□□□□ 0.15
SRSF1-202ENST00000578430 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 PSMD14O00487 310 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 FGAP02671 866 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 DIXDC1Q155Q3 683 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 IMMTQ16891 758 aaKnown RBP15.99■□□□□ 0.15
SRSF1-202ENST00000578430 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 GMLQ99445 158 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 NAPBQ9H115 298 aa15.99■□□□□ 0.15
SRSF1-202ENST00000578430 AATFQ9NY61 560 aaKnown RBP eCLIP15.99■□□□□ 0.15
SRSF1-202ENST00000578430 FZD9O00144 591 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 RAD17O75943 681 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 RPS12P25398 132 aaKnown RBP15.98■□□□□ 0.15
SRSF1-202ENST00000578430 PSMA5P28066 241 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 BTDP43251 543 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 EIF6P56537 245 aaKnown RBP15.98■□□□□ 0.15
SRSF1-202ENST00000578430 DYNLL1P63167 89 aaKnown RBP15.98■□□□□ 0.15
SRSF1-202ENST00000578430 CXCL9Q07325 125 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 ZDHHC15Q96MV8 337 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 MXD3Q9BW11 206 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 PALD1Q9ULE6 856 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 DAGLAQ9Y4D2 1042 aa15.98■□□□□ 0.15
SRSF1-202ENST00000578430 F8W031 263 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-202ENST00000578430 ZNF213O14771 459 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 ABCB7O75027 752 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 CYP21A2P08686 494 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 HSPA6P17066 643 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 CRKP46108 304 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 TDO2P48775 406 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 KIAA0825Q8IV33 1275 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
SRSF1-202ENST00000578430 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.15
SRSF1-202ENST00000578430 PRKAB2O43741 272 aa15.96■□□□□ 0.15
SRSF1-202ENST00000578430 OGFOD1Q8N543 542 aa15.96■□□□□ 0.15
SRSF1-202ENST00000578430 EPB41L4AQ9HCS5 686 aaPredicted RBP15.96■□□□□ 0.15
SRSF1-202ENST00000578430 ST18O60284 1047 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 HMGB1P09429 215 aaKnown RBP15.95■□□□□ 0.14
SRSF1-202ENST00000578430 SCNN1DP51172 638 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 PRELPP51888 382 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 RHBDL3P58872 404 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 BECN1Q14457 450 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 SBK1Q52WX2 424 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 TEX11Q8IYF3 940 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 SH3RF3Q8TEJ3 882 aaPredicted RBP15.95■□□□□ 0.14
SRSF1-202ENST00000578430 SNX21Q969T3 373 aa15.95■□□□□ 0.14
SRSF1-202ENST00000578430 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-202ENST00000578430 USP17L8P0C7I0 530 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 PCP11498 1178 aaKnown RBP15.94■□□□□ 0.14
SRSF1-202ENST00000578430 USP5P45974 858 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 NT5C2P49902 561 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 APOBEC3HQ6NTF7 200 aaKnown RBP15.94■□□□□ 0.14
SRSF1-202ENST00000578430 AMOTL1Q8IY63 956 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 MTMR14Q8NCE2 650 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 SDR42E1Q8WUS8 393 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 DPF2Q92785 391 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 ZSWIM6Q9HCJ5 1215 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-202ENST00000578430 ARPP21Q9UBL0 812 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-202ENST00000578430 ANAPC4Q9UJX5 808 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 LAMA4Q16363 1823 aa15.94■□□□□ 0.14
SRSF1-202ENST00000578430 SBF1O95248 1867 aa15.93■□□□□ 0.14
SRSF1-202ENST00000578430 KIF3CO14782 793 aa15.93■□□□□ 0.14
SRSF1-202ENST00000578430 MCM2P49736 904 aa15.93■□□□□ 0.14
SRSF1-202ENST00000578430 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
SRSF1-202ENST00000578430 RNF41Q9H4P4 317 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms