RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 LDHDQ86WU2 507 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 APOBEC3FQ8IUX4 373 aaKnown RBP16.7■□□□□ 0.26
LINC01543-201ENST00000578367 TRPM4Q8TD43 1214 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 NMRK2Q9NPI5 230 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 DIAPH3Q9NSV4 1193 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 RAD50Q92878 1312 aa16.7■□□□□ 0.26
LINC01543-201ENST00000578367 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
LINC01543-201ENST00000578367 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
LINC01543-201ENST00000578367 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
LINC01543-201ENST00000578367 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
LINC01543-201ENST00000578367 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
LINC01543-201ENST00000578367 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
LINC01543-201ENST00000578367 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
LINC01543-201ENST00000578367 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
LINC01543-201ENST00000578367 TNNI2P48788 182 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 RHBDL3P58872 404 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 NBPF9Q3BBW0 867 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 RBM26Q5T8P6 1007 aaKnown RBP16.68■□□□□ 0.26
LINC01543-201ENST00000578367 CDC42EP5Q6NZY7 148 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 GIMAP6Q6P9H5 292 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 ADGRA1Q86SQ6 560 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 ZNF784Q8NCA9 323 aaPredicted RBP16.68■□□□□ 0.26
LINC01543-201ENST00000578367 OSBP2Q969R2 916 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 DCPSQ96C86 337 aaKnown RBP16.68■□□□□ 0.26
LINC01543-201ENST00000578367 CRNKL1Q9BZJ0 848 aaKnown RBP16.68■□□□□ 0.26
LINC01543-201ENST00000578367 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
LINC01543-201ENST00000578367 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 DOCK2Q92608 1830 aa16.68■□□□□ 0.26
LINC01543-201ENST00000578367 MAST2Q6P0Q8 1798 aa16.67■□□□□ 0.26
LINC01543-201ENST00000578367 ENTPD3O75355 529 aa16.67■□□□□ 0.26
LINC01543-201ENST00000578367 CDC45O75419 566 aa16.67■□□□□ 0.26
LINC01543-201ENST00000578367 EGFRP00533 1210 aa16.67■□□□□ 0.26
LINC01543-201ENST00000578367 CHMLP26374 656 aa16.67■□□□□ 0.26
LINC01543-201ENST00000578367 TDRD3Q9H7E2 651 aaKnown RBP16.67■□□□□ 0.26
LINC01543-201ENST00000578367 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC01543-201ENST00000578367 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
LINC01543-201ENST00000578367 SKAP1Q86WV1 359 aa16.66■□□□□ 0.26
LINC01543-201ENST00000578367 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
LINC01543-201ENST00000578367 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
LINC01543-201ENST00000578367 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
LINC01543-201ENST00000578367 PUS7LQ9H0K6 701 aaKnown RBP16.66■□□□□ 0.26
LINC01543-201ENST00000578367 ATP8A2Q9NTI2 1148 aa16.66■□□□□ 0.26
LINC01543-201ENST00000578367 KIF3CO14782 793 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 GPAA1O43292 621 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 WDHD1O75717 1129 aaPredicted RBP16.65■□□□□ 0.26
LINC01543-201ENST00000578367 MBD4O95243 580 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 NMIQ13287 307 aaPredicted RBP16.65■□□□□ 0.26
LINC01543-201ENST00000578367 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 SULF1Q8IWU6 871 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 RBM46Q8TBY0 533 aaKnown RBP16.65■□□□□ 0.26
LINC01543-201ENST00000578367 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 HOOK2Q96ED9 719 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 GGA3Q9NZ52 723 aa16.65■□□□□ 0.26
LINC01543-201ENST00000578367 TOMM70O94826 608 aa16.64■□□□□ 0.25
LINC01543-201ENST00000578367 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
LINC01543-201ENST00000578367 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
LINC01543-201ENST00000578367 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
LINC01543-201ENST00000578367 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
LINC01543-201ENST00000578367 DHX36Q9H2U1 1008 aaKnown RBP16.64■□□□□ 0.25
LINC01543-201ENST00000578367 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
LINC01543-201ENST00000578367 A0A0D9SFI3 127 aa16.63■□□□□ 0.25
LINC01543-201ENST00000578367 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
LINC01543-201ENST00000578367 CWC27Q6UX04 472 aaKnown RBP16.63■□□□□ 0.25
LINC01543-201ENST00000578367 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
LINC01543-201ENST00000578367 FAM227BQ96M60 508 aa16.63■□□□□ 0.25
LINC01543-201ENST00000578367 CLEC11AQ9Y240 323 aa16.63■□□□□ 0.25
LINC01543-201ENST00000578367 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
LINC01543-201ENST00000578367 CCDC171Q6TFL3 1326 aa16.63■□□□□ 0.25
LINC01543-201ENST00000578367 CLRN2A0PK11 232 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 SGSM2O43147 1006 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
LINC01543-201ENST00000578367 DYNLL1P63167 89 aaKnown RBP16.62■□□□□ 0.25
LINC01543-201ENST00000578367 FSTL1Q12841 308 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 ALX1Q15699 326 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 KRT26Q7Z3Y9 468 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 SMC1BQ8NDV3 1235 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 DEFB129Q9H1M3 183 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 MKRN1Q9UHC7 482 aaKnown RBP16.62■□□□□ 0.25
LINC01543-201ENST00000578367 ZMYM6O95789 1325 aa16.62■□□□□ 0.25
LINC01543-201ENST00000578367 M0R2C6 588 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 USP5P45974 858 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 RASA3Q14644 834 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 DSCC1Q9BVC3 393 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 OSBPL5Q9H0X9 879 aaPredicted RBP16.61■□□□□ 0.25
LINC01543-201ENST00000578367 FAM198AQ9UFP1 575 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 SLC4A4Q9Y6R1 1079 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 ATRNL1Q5VV63 1379 aa16.61■□□□□ 0.25
LINC01543-201ENST00000578367 ADAMTSL1Q8N6G6 1762 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms