RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 CAPN10Q9HC96 672 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 METTL5Q9NRN9 209 aaKnown RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 IQSEC3Q9UPP2 1182 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 JRKLQ9Y4A0 524 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 PCDHGA4Q9Y5G9 962 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 AFDNP55196 1824 aaKnown RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 SHANK3Q9BYB0 1731 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 PCDH11XQ9BZA7 1347 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 PCDH11YQ9BZA8 1340 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 PI4KAP2A4QPH2 592 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 C3orf80F5H4A9 247 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 RPS6KA5O75582 802 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 CAVIN2O95810 425 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 CPP00450 1065 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 TPM1P09493 284 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 H2AFXP16104 143 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 MAGEA9P43362 315 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 IGBP1P78318 339 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 RBM6P78332 1123 aaKnown RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 CLDN10P78369 228 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 SF3B2Q13435 895 aaKnown RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 TOM1L2Q6ZVM7 507 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 SRLQ86TD4 932 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 PI4KAP1Q8N8J0 262 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 GTF3C2Q8WUA4 911 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 ZNF594Q96JF6 807 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 LRRCC1Q9C099 1032 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 USP44Q9H0E7 712 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 TTC12Q9H892 705 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 ATG3Q9NT62 314 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 ARGLU1Q9NWB6 273 aaPredicted RBP8.08□□□□□ -1.12
KRT39-203ENST00000578078 UBR2Q8IWV8 1755 aa8.08□□□□□ -1.12
KRT39-203ENST00000578078 ADCY9O60503 1353 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 PAPPAQ13219 1627 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 hCG_2014768A0A024R1R8 64 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 EPB41L2O43491 1005 aaKnown RBP8.07□□□□□ -1.12
KRT39-203ENST00000578078 ALDH1L1O75891 902 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
KRT39-203ENST00000578078 FANCCQ00597 558 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 FKBP4Q02790 459 aaKnown RBP eCLIP8.07□□□□□ -1.12
KRT39-203ENST00000578078 KMT5BQ4FZB7 885 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 BEND3Q5T5X7 828 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 CCDC181Q5TID7 509 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 KSR2Q6VAB6 950 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 MSL3Q8N5Y2 521 aaKnown RBP8.07□□□□□ -1.12
KRT39-203ENST00000578078 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 PPM1EQ8WY54 764 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 IL17RAQ96F46 866 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 UTP14AQ9BVJ6 771 aaKnown RBP8.07□□□□□ -1.12
KRT39-203ENST00000578078 UBXN6Q9BZV1 441 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 FAM107BQ9H098 131 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 DDX21Q9NR30 783 aaKnown RBP eCLIP8.07□□□□□ -1.12
KRT39-203ENST00000578078 TSKSQ9UJT2 592 aa8.07□□□□□ -1.12
KRT39-203ENST00000578078 COL14A1Q05707 1796 aaKnown RBP8.06□□□□□ -1.12
KRT39-203ENST00000578078 ARFGEF2Q9Y6D5 1785 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 NBPF26B4DH59 902 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
KRT39-203ENST00000578078 ANXA1P04083 346 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 MX1P20591 662 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 CDC25BP30305 580 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 CABP4P57796 275 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 RBL2Q08999 1139 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 TICAM2Q86XR7 235 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 PLPP7Q8NBV4 271 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 ZNF526Q8TF50 670 aaPredicted RBP8.06□□□□□ -1.12
KRT39-203ENST00000578078 RNF34Q969K3 372 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 FMNL2Q96PY5 1086 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 KCNG1Q9UIX4 513 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 MAP3K2Q9Y2U5 619 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 DNMT3AQ9Y6K1 912 aaPredicted RBP8.06□□□□□ -1.12
KRT39-203ENST00000578078 ROBO1Q9Y6N7 1651 aa8.06□□□□□ -1.12
KRT39-203ENST00000578078 PNMA6EA0A0J9YXQ4 647 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 CYP27B1O15528 508 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 DKK1O94907 266 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 SNRPA1P09661 255 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 TNNT1P13805 278 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 PLCG2P16885 1265 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 USP8P40818 1118 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 KCNH2Q12809 1159 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 SLC39A6Q13433 755 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 CUL4AQ13619 759 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 TTC31Q49AM3 519 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 HSP90AB4PQ58FF6 505 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 TMED8Q6PL24 325 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 C16orf71Q8IYS4 520 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 RNF214Q8ND24 703 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 ZCRB1Q8TBF4 217 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 SSH3Q8TE77 659 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 JARID2Q92833 1246 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 DNAAF2Q9NVR5 837 aaKnown RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 C9orf78Q9NZ63 289 aaPredicted RBP8.05□□□□□ -1.12
KRT39-203ENST00000578078 KLHL42Q9P2K6 505 aa8.05□□□□□ -1.12
KRT39-203ENST00000578078 ZDHHC9Q9Y397 364 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms