RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 ZAP70P43403 619 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 UTRNP46939 3433 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 SCARF1Q14162 830 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 DLGAP5Q15398 846 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 SCN9AQ15858 1988 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 SPTY2D1Q68D10 685 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 PNMA8AQ86V59 439 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 CHD1LQ86WJ1 897 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 ZGPATQ8N5A5 531 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 CERS5Q8N5B7 392 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 MYO3BQ8WXR4 1341 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 GMLQ99445 158 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 DNAJC2Q99543 621 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 RAI14Q9P0K7 980 aa8.16□□□□□ -1.1
PPP4R1-207ENST00000578010 ARID4AP29374 1257 aaPredicted RBP8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 MCAMP43121 646 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 NUCB1Q02818 461 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 GRIK5Q16478 980 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 CFAP100Q494V2 611 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 GPR153Q6NV75 609 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 PI16Q6UXB8 463 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 USP50Q70EL3 339 aaPredicted RBP8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 DZIP1Q86YF9 867 aaKnown RBP8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 SMC5Q8IY18 1101 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 SMC1BQ8NDV3 1235 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 RBM46Q8TBY0 533 aaKnown RBP8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 ZNF512BQ96KM6 892 aaPredicted RBP8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 MYOZ2Q9NPC6 264 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 ECHDC1Q9NTX5 307 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 NDUFB9Q9Y6M9 179 aa8.15□□□□□ -1.1
PPP4R1-207ENST00000578010 GOLIM4O00461 696 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 ERC2O15083 957 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 IDH1O75874 414 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 MAP4K4O95819 1239 aaPredicted RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 CYP2E1P05181 493 aaPredicted RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 ATP5JP18859 108 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 CRKP46108 304 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 MMP14P50281 582 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 ZNF280AP59817 542 aaPredicted RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 KIF4BQ2VIQ3 1234 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 TSHZ3Q63HK5 1081 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 SLF2Q8IX21 1173 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 DCPSQ96C86 337 aaKnown RBP8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 PPP4R2Q9NY27 417 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 SUGT1Q9Y2Z0 365 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 ARAP2Q8WZ64 1704 aa8.14□□□□□ -1.11
PPP4R1-207ENST00000578010 ZNF646O15015 1829 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 MYO1BO43795 1136 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 EGFRP00533 1210 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 LDHCP07864 332 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 PRDX5P30044 214 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 GSTO1P78417 241 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 MAP3K12Q12852 859 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 DSG2Q14126 1118 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 MAP1SQ66K74 1059 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 NAA16Q6N069 864 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 CENPQQ7L2Z9 268 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 USP48Q86UV5 1035 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 LDHDQ86WU2 507 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 PLPP6Q8IY26 295 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 CNTROBQ8N137 903 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 TEKT1Q969V4 418 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 PRMT6Q96LA8 375 aaPredicted RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 MRIQ9BWK5 157 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 ANTXR1Q9H6X2 564 aa8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 PIH1D3Q9NQM4 214 aaKnown RBP8.13□□□□□ -1.11
PPP4R1-207ENST00000578010 ADAMTSL1Q8N6G6 1762 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 CLRN2A0PK11 232 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 WNT10BO00744 389 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 GLRX3O76003 335 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 MX1P20591 662 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 CYP7A1P22680 504 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 PDE1AP54750 535 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 EMP3P54852 163 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 HDLBPQ00341 1268 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 MECOMQ03112 1051 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 FSTL1Q12841 308 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 MFSD10Q14728 455 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 DIXDC1Q155Q3 683 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 ANGEL2Q5VTE6 544 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 PAXIP1Q6ZW49 1069 aaPredicted RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 ZC3H15Q8WU90 426 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 PTCD2Q8WV60 388 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 EDC3Q96F86 508 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 HAUS7Q99871 368 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 NOL10Q9BSC4 688 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 VEZTQ9HBM0 779 aa8.12□□□□□ -1.11
PPP4R1-207ENST00000578010 USP40Q9NVE5 1235 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms