RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 WRNIP1Q96S55 665 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 TNNQ9UQP3 1299 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 RPAP1Q9BWH6 1393 aaPredicted RBP18.52■□□□□ 0.55
RN7SL560P-201ENST00000577943 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 GTF2A2P52657 109 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 MTX1Q13505 466 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 CDC42EP5Q6NZY7 148 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 ZGPATQ8N5A5 531 aaKnown RBP18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 FAM151AQ8WW52 585 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 TRIM17Q9Y577 477 aa18.51■□□□□ 0.55
RN7SL560P-201ENST00000577943 PDE4DIPQ5VU43 2346 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 CCL15-CCL14A0A0B4J2E2 113 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 GNAI2P04899 355 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 TCP10Q12799 353 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 TFCP2Q12800 502 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 CCL15Q16663 113 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 MIGA2Q7L4E1 593 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 ZKSCAN4Q969J2 545 aaPredicted RBP18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 ERO1AQ96HE7 468 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 ZNF341Q9BYN7 854 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 SNCAIPQ9Y6H5 919 aa18.5■□□□□ 0.55
RN7SL560P-201ENST00000577943 DOCK2Q92608 1830 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 SPDYE5A6NIY4 337 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 TAF1CQ15572 869 aaPredicted RBP18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 ERO1BQ86YB8 467 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 MIER1Q8N108 512 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 BRI3BPQ8WY22 251 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 XAGE2Q96GT9 111 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 USP40Q9NVE5 1235 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 ABCF2Q9UG63 623 aa18.49■□□□□ 0.55
RN7SL560P-201ENST00000577943 ZBTB22O15209 634 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 NFIAQ12857 509 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 RASGRF1Q13972 1273 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 MVPQ14764 893 aaKnown RBP18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 OTOP1Q7RTM1 612 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 DZIP1Q86YF9 867 aaKnown RBP18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 CD99L2Q8TCZ2 262 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
RN7SL560P-201ENST00000577943 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
RN7SL560P-201ENST00000577943 CENPFP49454 3210 aa18.47■□□□□ 0.55
RN7SL560P-201ENST00000577943 SP3Q02447 781 aa18.47■□□□□ 0.55
RN7SL560P-201ENST00000577943 G3BP1Q13283 466 aaKnown RBP eCLIP18.47■□□□□ 0.55
RN7SL560P-201ENST00000577943 ZFYVE28Q9HCC9 887 aa18.47■□□□□ 0.55
RN7SL560P-201ENST00000577943 PNMA6EA0A0J9YXQ4 647 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 IRF6O14896 467 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 CETPP11597 493 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 INPP5BP32019 993 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 GORABQ5T7V8 394 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 DIEXFQ68CQ4 756 aaKnown RBP18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 SPTY2D1Q68D10 685 aaPredicted RBP18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 SLF2Q8IX21 1173 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 FAM43AQ8N2R8 423 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 TMEM57Q8N5G2 664 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 FAM198AQ9UFP1 575 aa18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 PDS5AQ29RF7 1337 aaKnown RBP18.46■□□□□ 0.55
RN7SL560P-201ENST00000577943 WDHD1O75717 1129 aaPredicted RBP18.45■□□□□ 0.54
RN7SL560P-201ENST00000577943 PPIL2Q13356 520 aa18.45■□□□□ 0.54
RN7SL560P-201ENST00000577943 EFCC1Q9HA90 598 aa18.45■□□□□ 0.54
RN7SL560P-201ENST00000577943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.45■□□□□ 0.54
RN7SL560P-201ENST00000577943 HTTP42858 3142 aa18.44■□□□□ 0.54
RN7SL560P-201ENST00000577943 KIAA0100Q14667 2235 aaKnown RBP18.44■□□□□ 0.54
RN7SL560P-201ENST00000577943 PPATQ06203 517 aa18.44■□□□□ 0.54
RN7SL560P-201ENST00000577943 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
RN7SL560P-201ENST00000577943 GAKO14976 1311 aa18.44■□□□□ 0.54
RN7SL560P-201ENST00000577943 BTBD19C9JJ37 291 aa18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 RGS3P49796 1198 aa18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 ZSCAN29Q8IWY8 852 aaPredicted RBP18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 FTSJ3Q8IY81 847 aaKnown RBP18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 IDI2Q9BXS1 227 aa18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 ZNF112Q9UJU3 913 aa18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 PTPN22Q9Y2R2 807 aa18.43■□□□□ 0.54
RN7SL560P-201ENST00000577943 ENTPD3O75355 529 aa18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 BTDP43251 543 aa18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 ARHGEF6Q15052 776 aa18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 FAM163AQ96GL9 167 aaPredicted RBP18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 ZCCHC17Q9NP64 241 aaKnown RBP18.42■□□□□ 0.54
RN7SL560P-201ENST00000577943 MYO5AQ9Y4I1 1855 aaKnown RBP18.41■□□□□ 0.54
RN7SL560P-201ENST00000577943 MECOMQ03112 1051 aa18.41■□□□□ 0.54
RN7SL560P-201ENST00000577943 SPATA5Q8NB90 893 aa18.41■□□□□ 0.54
RN7SL560P-201ENST00000577943 HMG20BQ9P0W2 317 aa18.41■□□□□ 0.54
RN7SL560P-201ENST00000577943 ZSWIM8A7E2V4 1837 aa18.41■□□□□ 0.54
RN7SL560P-201ENST00000577943 MROH7-TTC4A0A0A0MT08 1334 aa18.41■□□□□ 0.54
RN7SL560P-201ENST00000577943 DOCK1Q14185 1865 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 TLR2O60603 784 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 CAP1Q01518 475 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 OS9Q13438 667 aaPredicted RBP18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 PICALMQ13492 652 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 NOL9Q5SY16 702 aaKnown RBP18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 PI16Q6UXB8 463 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 PTPRFP10586 1907 aa18.4■□□□□ 0.54
RN7SL560P-201ENST00000577943 ATP8B2P98198 1209 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms