RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 GABRQQ9UN88 632 aa18.02■□□□□ 0.48
PPP4R1-206ENST00000577779 INHAP05111 366 aa18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 ELNP15502 786 aa18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 LRIT3Q3SXY7 679 aa18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 C7orf61Q8IZ16 206 aa18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 ZMYND8Q9ULU4 1186 aaPredicted RBP18.01■□□□□ 0.47
PPP4R1-206ENST00000577779 TTC28Q96AY4 2481 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 BCAMP50895 628 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
PPP4R1-206ENST00000577779 RALBP1Q15311 655 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 DCAF15Q66K64 600 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 NECAB2Q7Z6G3 386 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 TDRD7Q8NHU6 1098 aaKnown RBP18■□□□□ 0.47
PPP4R1-206ENST00000577779 STK31Q9BXU1 1019 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 MYH16Q9H6N6 1097 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 CHMP3Q9Y3E7 222 aa18■□□□□ 0.47
PPP4R1-206ENST00000577779 DNAH12Q6ZR08 3092 aa17.99■□□□□ 0.47
PPP4R1-206ENST00000577779 BCRP11274 1271 aa17.99■□□□□ 0.47
PPP4R1-206ENST00000577779 ZNF341Q9BYN7 854 aa17.99■□□□□ 0.47
PPP4R1-206ENST00000577779 RNF39Q9H2S5 420 aa17.99■□□□□ 0.47
PPP4R1-206ENST00000577779 TMOD2Q9NZR1 351 aa17.99■□□□□ 0.47
PPP4R1-206ENST00000577779 KCNH4Q9UQ05 1017 aa17.99■□□□□ 0.47
PPP4R1-206ENST00000577779 HIBADHP31937 336 aaKnown RBP17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 INPP5BP32019 993 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 GYG1P46976 350 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 FLT3LGP49771 235 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 FAM83AQ86UY5 434 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 TDHQ8IZJ6 230 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 TSPYL6Q8N831 410 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 PXYLP1Q8TE99 480 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 DIS3LQ8TF46 1054 aaKnown RBP17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 CRISPLD2Q9H0B8 497 aa17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 PAK6Q9NQU5 681 aaPredicted RBP17.98■□□□□ 0.47
PPP4R1-206ENST00000577779 CYP2C8P10632 490 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 MOGSQ13724 837 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 MIGA2Q7L4E1 593 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 G2E3Q7L622 706 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 CNNM1Q9NRU3 951 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
PPP4R1-206ENST00000577779 MAGEA10P43363 369 aaPredicted RBP17.96■□□□□ 0.47
PPP4R1-206ENST00000577779 HDLBPQ00341 1268 aaKnown RBP17.96■□□□□ 0.47
PPP4R1-206ENST00000577779 GRIK5Q16478 980 aa17.96■□□□□ 0.47
PPP4R1-206ENST00000577779 TAF7LQ5H9L4 462 aa17.96■□□□□ 0.47
PPP4R1-206ENST00000577779 FKBP1CQ5VVH2 108 aa17.96■□□□□ 0.47
PPP4R1-206ENST00000577779 LDHAL6AQ6ZMR3 332 aa17.96■□□□□ 0.47
PPP4R1-206ENST00000577779 SYN1P17600 705 aa17.95■□□□□ 0.46
PPP4R1-206ENST00000577779 FOXO4P98177 505 aa17.95■□□□□ 0.46
PPP4R1-206ENST00000577779 ZNF594Q96JF6 807 aaPredicted RBP17.95■□□□□ 0.46
PPP4R1-206ENST00000577779 FAM84BQ96KN1 310 aaPredicted RBP17.95■□□□□ 0.46
PPP4R1-206ENST00000577779 UBE2OQ9C0C9 1292 aaKnown RBP17.95■□□□□ 0.46
PPP4R1-206ENST00000577779 TAOK2Q9UL54 1235 aa17.95■□□□□ 0.46
PPP4R1-206ENST00000577779 RPAP1Q9BWH6 1393 aaPredicted RBP17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 IRF5Q13568 498 aa17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 UBE4AQ14139 1066 aa17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 GPAT2Q6NUI2 795 aa17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 LINS1Q8NG48 757 aa17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 RPTORQ8N122 1335 aa17.94■□□□□ 0.46
PPP4R1-206ENST00000577779 LMBR1LQ6UX01 489 aa17.93■□□□□ 0.46
PPP4R1-206ENST00000577779 ANKLE1Q8NAG6 615 aa17.93■□□□□ 0.46
PPP4R1-206ENST00000577779 ZDHHC15Q96MV8 337 aa17.93■□□□□ 0.46
PPP4R1-206ENST00000577779 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.93■□□□□ 0.461e-10■■■■■ 30
PPP4R1-206ENST00000577779 IQSEC3Q9UPP2 1182 aaPredicted RBP17.93■□□□□ 0.46
PPP4R1-206ENST00000577779 VPS37DQ86XT2 251 aa17.92■□□□□ 0.46
PPP4R1-206ENST00000577779 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
PPP4R1-206ENST00000577779 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
PPP4R1-206ENST00000577779 NBPF3Q9H094 633 aa17.92■□□□□ 0.46
PPP4R1-206ENST00000577779 ZNF112Q9UJU3 913 aa17.92■□□□□ 0.46
PPP4R1-206ENST00000577779 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
PPP4R1-206ENST00000577779 MUC3AQ02505 3323 aa17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 CXCL11O14625 94 aa17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 APAF1O14727 1248 aa17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 FLIIQ13045 1269 aa17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 FKBP5Q13451 457 aaPredicted RBP17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 APOBEC3HQ6NTF7 200 aaKnown RBP17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 PRDM6Q9NQX0 595 aa17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
PPP4R1-206ENST00000577779 NOL9Q5SY16 702 aaKnown RBP17.9■□□□□ 0.46
PPP4R1-206ENST00000577779 FASTKD5Q7L8L6 764 aaKnown RBP17.9■□□□□ 0.46
PPP4R1-206ENST00000577779 COA7Q96BR5 231 aa17.9■□□□□ 0.46
PPP4R1-206ENST00000577779 DOCK3Q8IZD9 2030 aa17.89■□□□□ 0.46
PPP4R1-206ENST00000577779 SMCR8Q8TEV9 937 aaPredicted RBP17.89■□□□□ 0.45
PPP4R1-206ENST00000577779 FAM151AQ8WW52 585 aa17.89■□□□□ 0.45
PPP4R1-206ENST00000577779 GUCD1Q96NT3 240 aa17.89■□□□□ 0.45
PPP4R1-206ENST00000577779 MRIQ9BWK5 157 aa17.89■□□□□ 0.45
PPP4R1-206ENST00000577779 C11orf49Q9H6J7 331 aa17.89■□□□□ 0.45
PPP4R1-206ENST00000577779 DDX60LQ5H9U9 1706 aaKnown RBP17.89■□□□□ 0.45
PPP4R1-206ENST00000577779 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
PPP4R1-206ENST00000577779 GADL1Q6ZQY3 521 aa17.88■□□□□ 0.45
PPP4R1-206ENST00000577779 FBXO33Q7Z6M2 555 aa17.88■□□□□ 0.45
PPP4R1-206ENST00000577779 TSR2Q969E8 191 aaKnown RBP17.88■□□□□ 0.45
PPP4R1-206ENST00000577779 MAST3O60307 1309 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms