RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 CDCA7Q9BWT1 371 aaPredicted RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 CHCHD3Q9NX63 227 aaKnown RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 THOC2Q8NI27 1593 aaKnown RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 FAM71BQ8TC56 605 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 XAB2Q9HCS7 855 aaKnown RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 CASC4Q6P4E1 433 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 PICK1Q9NRD5 415 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 EFCAB5A4FU69 1503 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 GNAI3P08754 354 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 EVCP57679 992 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 TCIRG1Q13488 830 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 PICALMQ13492 652 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 SEC62Q99442 399 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 MRFAP1Q9Y605 127 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 RPGRIP1LQ68CZ1 1315 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 IFRD2Q12894 506 aaPredicted RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 VCX3BQ9H321 246 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 IGHDP01880 384 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 GNAI2P04899 355 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 BRD3Q15059 726 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 SLC24A3Q9HC58 644 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 CEP104O60308 925 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 KRT5P13647 590 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 FAM69CQ0P6D2 419 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 KHDRBS2Q5VWX1 349 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 NBPF10Q6P3W6 841 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 ZNF449Q6P9G9 518 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 ZMAT2Q96NC0 199 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 GCFC2P16383 781 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 TYRO3Q06418 890 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 HDGFL1Q5TGJ6 251 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 CWC27Q6UX04 472 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 FBXO18Q8NFZ0 1043 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 MICAL1Q8TDZ2 1067 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 FAM204AQ9H8W3 233 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 TULP2O00295 520 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 IL1RL1Q01638 556 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 FOXD4Q12950 439 aaPredicted RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 DTNBP1Q96EV8 351 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 TSPY2A6NKD2 308 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 RYBPQ8N488 228 aaPredicted RBP9.86□□□□□ -0.83
CDH8-203ENST00000577390 GAS2L2Q8NHY3 880 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 KAT14Q9H8E8 782 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 ATP6V0A2Q9Y487 856 aa9.86□□□□□ -0.83
CDH8-203ENST00000577390 CIB2O75838 187 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 SELENOSQ9BQE4 189 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 SELENOOQ9BVL4 669 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 STX8Q9UNK0 236 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 MAP3K12Q12852 859 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 C16orf72Q14CZ0 275 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDH8-203ENST00000577390 ANO10Q9NW15 660 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 BAG5Q9UL15 447 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 KIAA1107Q9UPP5 1409 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 MAN1A1P33908 653 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 CC2D2BQ6DHV5 1058 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 EXOC1Q9NV70 894 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 GNG11P61952 73 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 SEMA3FQ13275 785 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 RUNDC1Q96C34 613 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 FAM193BQ96PV7 902 aaPredicted RBP9.85□□□□□ -0.83
CDH8-203ENST00000577390 ANLNQ9NQW6 1124 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 PTPRCP08575 1304 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 PDE4BQ07343 736 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 TSC22D1Q15714 1073 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 CLUL1Q15846 466 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.85□□□□□ -0.83
CDH8-203ENST00000577390 ITKQ08881 620 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 PPP1R7Q15435 360 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 TAOK1Q7L7X3 1001 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 USP48Q86UV5 1035 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 LMNTD2Q8IXW0 634 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 DNAJC7Q99615 494 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 GIMAP4Q9NUV9 329 aa9.85□□□□□ -0.83
CDH8-203ENST00000577390 SLC4A1P02730 911 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 SLC5A1P13866 664 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 CTAGE9A4FU28 777 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 NDUFAB1O14561 156 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 TOP1P11387 765 aaKnown RBP9.84□□□□□ -0.83
CDH8-203ENST00000577390 ABCF3Q9NUQ8 709 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 PARD3Q8TEW0 1356 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 EFCAB8A8MWE9 144 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 MRRFQ96E11 262 aaKnown RBP9.84□□□□□ -0.83
CDH8-203ENST00000577390 KCNK9Q9NPC2 374 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 SPDYE3A6NKU9 549 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 UBXN8O00124 270 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 SLC12A2P55011 1212 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
CDH8-203ENST00000577390 ARMCX6Q7L4S7 300 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 NEUROG2Q9H2A3 272 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 NPR1P16066 1061 aa9.84□□□□□ -0.83
CDH8-203ENST00000577390 RWDD2BP57060 319 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms