RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NBPF7P0C2Y1 421 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 ANKRD23Q86SG2 305 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 TBC1D22AQ8WUA7 517 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 MRIQ9BWK5 157 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 TMOD2Q9NZR1 351 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 ARAP2Q8WZ64 1704 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 MYPNQ86TC9 1320 aa12.78□□□□□ -0.36
NPLOC4-220ENST00000576940 PRKCZQ05513 592 aa12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 MOGSQ13724 837 aa12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 CAVIN4Q5BKX8 364 aa12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 DCAF15Q66K64 600 aa12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 SLC17A8Q8NDX2 589 aa12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 GABRQQ9UN88 632 aa12.77□□□□□ -0.37
NPLOC4-220ENST00000576940 ALDH1L1O75891 902 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 PDE8BO95263 885 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 CYP2C8P10632 490 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 TCP10Q12799 353 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 FKBP1CQ5VVH2 108 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 KLHDC4Q8TBB5 520 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 HOOK2Q96ED9 719 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 HTATIP2Q9BUP3 242 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 UNC93B1Q9H1C4 597 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 KCNH4Q9UQ05 1017 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 CACNA1FO60840 1977 aa12.76□□□□□ -0.37
NPLOC4-220ENST00000576940 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 UBXN2AP68543 259 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 HHIPL2Q6UWX4 724 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 FAM151AQ8WW52 585 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 BICC1Q9H694 974 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
NPLOC4-220ENST00000576940 SOX1O00570 391 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-220ENST00000576940 SGPL1O95470 568 aa12.74□□□□□ -0.37
NPLOC4-220ENST00000576940 BCRP11274 1271 aa12.74□□□□□ -0.37
NPLOC4-220ENST00000576940 NFIAQ12857 509 aa12.74□□□□□ -0.37
NPLOC4-220ENST00000576940 ZFPM1Q8IX07 1006 aa12.74□□□□□ -0.37
NPLOC4-220ENST00000576940 COL6A3P12111 3177 aa12.74□□□□□ -0.37
NPLOC4-220ENST00000576940 FARP2O94887 1054 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 FCGRTP55899 365 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 ANKRD44Q8N8A2 993 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 LRCH3Q96II8 777 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 STAP2Q9UGK3 403 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 SUGT1Q9Y2Z0 365 aa12.73□□□□□ -0.37
NPLOC4-220ENST00000576940 ADCY3O60266 1144 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 EVI5O60447 810 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 ELNP15502 786 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 FGFR2P21802 821 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 FLT3LGP49771 235 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 ZHX2Q9Y6X8 837 aa12.72□□□□□ -0.37
NPLOC4-220ENST00000576940 A0A0C4DFX4 3053 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 UTYO14607 1347 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 MAST3O60307 1309 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 AK9Q5TCS8 1911 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 CXCL11O14625 94 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 NOL9Q5SY16 702 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
NPLOC4-220ENST00000576940 RPAP1Q9BWH6 1393 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-220ENST00000576940 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
NPLOC4-220ENST00000576940 INHAP05111 366 aa12.7□□□□□ -0.38
NPLOC4-220ENST00000576940 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-220ENST00000576940 WDR66Q8TBY9 1149 aa12.7□□□□□ -0.38
NPLOC4-220ENST00000576940 PAWRQ96IZ0 340 aaKnown RBP12.7□□□□□ -0.38
NPLOC4-220ENST00000576940 PTPRAP18433 802 aa12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 PRDX5P30044 214 aa12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 GADL1Q6ZQY3 521 aa12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 FASTKD5Q7L8L6 764 aaKnown RBP12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
NPLOC4-220ENST00000576940 MGAMO43451 1857 aa12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 A0A0G2JLL6 359 aaPredicted RBP12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
NPLOC4-220ENST00000576940 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms