RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 BEND6Q5SZJ8 279 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 C6orf132Q5T0Z8 1188 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 GORABQ5T7V8 394 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 MYSM1Q5VVJ2 828 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 MTHFD1LQ6UB35 978 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 FAM114A1Q8IWE2 563 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 GBP7Q8N8V2 638 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 TRIM58Q8NG06 486 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CARD6Q9BX69 1037 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 TSGA10Q9BZW7 698 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 LNPKQ9C0E8 428 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 ACTR5Q9H9F9 607 aaPredicted RBP9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 TRPV5Q9NQA5 729 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
TOM1L1-220ENST00000575333 PLA2R1Q13018 1463 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 ANKRD65E5RJM6 399 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 MEFVO15553 781 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 E2F6O75461 281 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 RASSF9O75901 435 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 VCAM1P19320 739 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 RANBP1P43487 201 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 GJA8P48165 433 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 PAPOLAP51003 745 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 GNL2Q13823 731 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 FOXD4L6Q3SYB3 417 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 FOXD4L3Q6VB84 417 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC80Q76M96 950 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 HOMER1Q86YM7 354 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 FAM177A1Q8N128 213 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 ATL2Q8NHH9 583 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 SMCR8Q8TEV9 937 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 TEKT1Q969V4 418 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 IL17RAQ96F46 866 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 MMADHCQ9H3L0 296 aaPredicted RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 UNC45AQ9H3U1 944 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 VCPKMTQ9H867 229 aa9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 TRMT1Q9NXH9 659 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 EIF2AK4Q9P2K8 1649 aaKnown RBP9.07□□□□□ -0.96
TOM1L1-220ENST00000575333 TCHHQ07283 1943 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 LUC7L3O95232 432 aaKnown RBP9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 ZSCAN22P10073 491 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 CCT5P48643 541 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 SESN3P58005 492 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 PPP2R3AQ06190 1150 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 KCNB1Q14721 858 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC40Q4G0X9 1142 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 ZNF280DQ6N043 979 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 MSANTD4Q8NCY6 345 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 LRRN4CLQ8ND94 238 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 LZICQ8WZA0 190 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 SMARCC1Q92922 1105 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 POLR3CQ9BUI4 534 aaPredicted RBP9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 ZBTB40Q9NUA8 1239 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 DDX20Q9UHI6 824 aaKnown RBP9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 ITGB1BP2Q9UKP3 347 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 L1RE1Q9UN81 338 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 MED14O60244 1454 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
TOM1L1-220ENST00000575333 MAST1Q9Y2H9 1570 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ZSCAN12O43309 604 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ZEB2O60315 1214 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 URI1O94763 535 aaPredicted RBP9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 SYT1P21579 422 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 MCM3P25205 808 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ZNF165P49910 485 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 SNX1Q13596 522 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ANO6Q4KMQ2 910 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 MFSD4BQ5TF39 518 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 E4F1Q66K89 784 aaPredicted RBP9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 MIS18BP1Q6P0N0 1132 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 SAMD3Q8N6K7 520 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 KRI1Q8N9T8 703 aaKnown RBP9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 CCDC102AQ96A19 550 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 JAKMIP2Q96AA8 810 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 TRIM4Q9C037 500 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 WDR37Q9Y2I8 494 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 FRMD4BQ9Y2L6 1034 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ERBINQ96RT1 1412 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 SMAPO00193 183 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 IPO5O00410 1097 aaKnown RBP9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 ABLIM1O14639 778 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 GNPATO15228 680 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 NAT1P18440 290 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 PPFIA1Q13136 1202 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 CUL3Q13618 768 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 HIC1Q14526 733 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 TSNAXIP1Q2TAA8 658 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 GALNT15Q8N3T1 639 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 CXorf38Q8TB03 319 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 CCHCR1Q8TD31 782 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 RBM41Q96IZ5 413 aaKnown RBP9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 CFAP53Q96M91 514 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 TMOD4Q9NZQ9 345 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
TOM1L1-220ENST00000575333 MRFAP1Q9Y605 127 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms