RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 MAP3K12Q12852 859 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 ATG9AQ7Z3C6 839 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.83□□□□□ -0.84
RPAIN-215ENST00000575112 NSUN7Q8NE18 718 aaKnown RBP9.83□□□□□ -0.84
RPAIN-215ENST00000575112 ATRIPQ8WXE1 791 aa9.83□□□□□ -0.84
RPAIN-215ENST00000575112 NEDD4P46934 1319 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 ZNF609O15014 1411 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 SPTLC2O15270 562 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 ZBTB43O43298 467 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 PNMA6AP0CW24 399 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 MRFAP1L1Q96HT8 127 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 LCMT1Q9UIC8 334 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 MED23Q9ULK4 1368 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 DIP2BQ9P265 1576 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 SMIM22K7EJ46 135 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 STX1AQ16623 288 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 FAM98CQ17RN3 349 aaKnown RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 TRMT44Q8IYL2 757 aaKnown RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 GPR101Q96P66 508 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 NWD1Q149M9 1564 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 KCNQ2O43526 872 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 CCDC102BQ68D86 513 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 MFSD6Q6ZSS7 791 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 GRAMD1CQ8IYS0 662 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 ERO1AQ96HE7 468 aa9.82□□□□□ -0.84
RPAIN-215ENST00000575112 NOL10Q9BSC4 688 aaKnown RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 IRX2Q9BZI1 471 aaPredicted RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 PIH1D3Q9NQM4 214 aaKnown RBP9.82□□□□□ -0.84
RPAIN-215ENST00000575112 CEMIPQ8WUJ3 1361 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 EPB41L2O43491 1005 aaKnown RBP9.81□□□□□ -0.84
RPAIN-215ENST00000575112 H2AFXP16104 143 aaPredicted RBP9.81□□□□□ -0.84
RPAIN-215ENST00000575112 MCAMP43121 646 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 DDB1Q16531 1140 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 FDPSP14324 419 aaKnown RBP9.81□□□□□ -0.84
RPAIN-215ENST00000575112 MTX1Q13505 466 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 SYCP1Q15431 976 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 FAM47AQ5JRC9 791 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 CARD6Q9BX69 1037 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 ANKIB1Q9P2G1 1089 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 G3V3G9 751 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 HMGB1P09429 215 aaKnown RBP9.81□□□□□ -0.84
RPAIN-215ENST00000575112 SLC5A1P13866 664 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 SART3Q15020 963 aaKnown RBP9.81□□□□□ -0.84
RPAIN-215ENST00000575112 DCAF8Q5TAQ9 597 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 SARM1Q6SZW1 724 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 OLFM4Q6UX06 510 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 TRIM22Q8IYM9 498 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 MRPS27Q92552 414 aaKnown RBP9.81□□□□□ -0.84
RPAIN-215ENST00000575112 SMARCE1Q969G3 411 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 HSD3B7Q9H2F3 369 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 DIP2AQ14689 1571 aa9.81□□□□□ -0.84
RPAIN-215ENST00000575112 TRIM66O15016 1216 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 CASP1P29466 404 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 SYKP43405 635 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 RFX5P48382 616 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 UTP14AQ9BVJ6 771 aaKnown RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 TRIM34Q9BYJ4 488 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 CABP5Q9NP86 173 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 SPATA31D1Q6ZQQ2 1576 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 BTBD18B2RXH4 712 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 ANKRD65E5RJM6 399 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 H7C1W4 665 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 URI1O94763 535 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 PNOCQ13519 176 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 NAT10Q9H0A0 1025 aaKnown RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 ANO10Q9NW15 660 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 RCOR1Q9UKL0 485 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 CACNA1FO60840 1977 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 NALCNQ8IZF0 1738 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 KIF28PB7ZC32 967 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 CDC25AP30304 524 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 FMR1NBQ8N0W7 255 aaPredicted RBP9.8□□□□□ -0.84
RPAIN-215ENST00000575112 APPBP2Q92624 585 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
RPAIN-215ENST00000575112 MARCH6O60337 910 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 PDE6AP16499 860 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 CDC25BP30305 580 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 SSRP1Q08945 709 aaKnown RBP9.79□□□□□ -0.84
RPAIN-215ENST00000575112 NCAPHQ15003 741 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 ZMYM1Q5SVZ6 1142 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 WDR24Q96S15 920 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.79□□□□□ -0.841e-9■□□□□ 9.3
RPAIN-215ENST00000575112 LRRC37A3O60309 1634 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 FOXN1O15353 648 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 DYNLL1P63167 89 aaKnown RBP9.79□□□□□ -0.84
RPAIN-215ENST00000575112 KRT40Q6A162 431 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 TRIM65Q6PJ69 517 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 DHX58Q96C10 678 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 TIGD1Q96MW7 591 aa9.79□□□□□ -0.84
RPAIN-215ENST00000575112 ZSCAN16Q9H4T2 348 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-215ENST00000575112 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms