RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 GJA5P36382 358 aa24.28■■□□□ 1.48
SCARF1-208ENST00000574545 NFIAQ12857 509 aa24.28■■□□□ 1.48
SCARF1-208ENST00000574545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.28■■□□□ 1.48
SCARF1-208ENST00000574545 ZNF384Q8TF68 577 aa24.28■■□□□ 1.48
SCARF1-208ENST00000574545 FAM151AQ8WW52 585 aa24.28■■□□□ 1.48
SCARF1-208ENST00000574545 ABCF2Q9UG63 623 aa24.28■■□□□ 1.48
SCARF1-208ENST00000574545 MAP3K9P80192 1104 aa24.27■■□□□ 1.48
SCARF1-208ENST00000574545 SREBF2Q12772 1141 aa24.27■■□□□ 1.48
SCARF1-208ENST00000574545 PI16Q6UXB8 463 aa24.27■■□□□ 1.48
SCARF1-208ENST00000574545 SPATA5Q8NB90 893 aa24.27■■□□□ 1.48
SCARF1-208ENST00000574545 FAM198AQ9UFP1 575 aa24.27■■□□□ 1.48
SCARF1-208ENST00000574545 OTOFQ9HC10 1997 aa24.26■■□□□ 1.47
SCARF1-208ENST00000574545 MCAMP43121 646 aa24.26■■□□□ 1.47
SCARF1-208ENST00000574545 GORABQ5T7V8 394 aa24.26■■□□□ 1.47
SCARF1-208ENST00000574545 SPTY2D1Q68D10 685 aaPredicted RBP24.26■■□□□ 1.47
SCARF1-208ENST00000574545 DBNDD2Q9BQY9 259 aa24.26■■□□□ 1.47
SCARF1-208ENST00000574545 CFHR5Q9BXR6 569 aa24.26■■□□□ 1.47
SCARF1-208ENST00000574545 USP40Q9NVE5 1235 aa24.26■■□□□ 1.47
SCARF1-208ENST00000574545 LAMB1P07942 1786 aa24.25■■□□□ 1.47
SCARF1-208ENST00000574545 MANSC4A6NHS7 340 aaPredicted RBP24.25■■□□□ 1.47
SCARF1-208ENST00000574545 CAPN15O75808 1086 aa24.25■■□□□ 1.47
SCARF1-208ENST00000574545 INHBEP58166 350 aa24.25■■□□□ 1.47
SCARF1-208ENST00000574545 ZBTB40Q9NUA8 1239 aa24.25■■□□□ 1.47
SCARF1-208ENST00000574545 MYH2Q9UKX2 1941 aa24.25■■□□□ 1.47
SCARF1-208ENST00000574545 UQCRFS1P1P0C7P4 283 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 MECOMQ03112 1051 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 OS9Q13438 667 aaPredicted RBP24.24■■□□□ 1.47
SCARF1-208ENST00000574545 TBC1D9Q6ZT07 1266 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 ERICH6Q7L0X2 663 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 ABHD8Q96I13 439 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 IDI2Q9BXS1 227 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 ELP3Q9H9T3 547 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 DDX19BQ9UMR2 479 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 COG6Q9Y2V7 657 aa24.24■■□□□ 1.47
SCARF1-208ENST00000574545 TESPA1A2RU30 521 aaPredicted RBP24.23■■□□□ 1.47
SCARF1-208ENST00000574545 TBC1D8O95759 1140 aa24.23■■□□□ 1.47
SCARF1-208ENST00000574545 VGLL4Q14135 290 aa24.23■■□□□ 1.47
SCARF1-208ENST00000574545 DZIP1Q86YF9 867 aaKnown RBP24.23■■□□□ 1.47
SCARF1-208ENST00000574545 ZFPM1Q8IX07 1006 aa24.23■■□□□ 1.47
SCARF1-208ENST00000574545 NSUN4Q96CB9 384 aaKnown RBP24.23■■□□□ 1.47
SCARF1-208ENST00000574545 EAF2Q96CJ1 260 aaPredicted RBP24.23■■□□□ 1.47
SCARF1-208ENST00000574545 ZNF512BQ96KM6 892 aaPredicted RBP24.23■■□□□ 1.47
SCARF1-208ENST00000574545 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.23■■□□□ 1.47
SCARF1-208ENST00000574545 RFX7Q2KHR2 1363 aa24.22■■□□□ 1.47
SCARF1-208ENST00000574545 GPR75-ASB3A0A0A6YYF3 556 aa24.22■■□□□ 1.47
SCARF1-208ENST00000574545 NOM1Q5C9Z4 860 aaKnown RBP24.22■■□□□ 1.47
SCARF1-208ENST00000574545 SLF2Q8IX21 1173 aa24.22■■□□□ 1.47
SCARF1-208ENST00000574545 HOOK2Q96ED9 719 aa24.22■■□□□ 1.47
SCARF1-208ENST00000574545 MCOLN1Q9GZU1 580 aa24.22■■□□□ 1.47
SCARF1-208ENST00000574545 R3HDMLQ9H3Y0 253 aa24.22■■□□□ 1.47
SCARF1-208ENST00000574545 DBNLQ9UJU6 430 aaKnown RBP24.22■■□□□ 1.47
SCARF1-208ENST00000574545 MROH7-TTC4A0A0A0MT08 1334 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 IGF2BP3O00425 579 aaKnown RBP eCLIP24.21■■□□□ 1.47
SCARF1-208ENST00000574545 TCP10Q12799 353 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 IFNL1Q8IU54 200 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 SIRT2Q8IXJ6 389 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 RPAP2Q8IXW5 612 aaPredicted RBP24.21■■□□□ 1.47
SCARF1-208ENST00000574545 CNKSR2Q8WXI2 1034 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 OPTNQ96CV9 577 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 MS4A4AQ96JQ5 239 aa24.21■■□□□ 1.47
SCARF1-208ENST00000574545 WDHD1O75717 1129 aaPredicted RBP24.2■■□□□ 1.46
SCARF1-208ENST00000574545 BTDP43251 543 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 RHBDL3P58872 404 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 CCDC158Q5M9N0 1113 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 MIGA2Q7L4E1 593 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 PTPN18Q99952 460 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 TLR7Q9NYK1 1049 aaKnown RBP24.2■■□□□ 1.46
SCARF1-208ENST00000574545 ZNF112Q9UJU3 913 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 EXOC6BQ9Y2D4 811 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 SNCAIPQ9Y6H5 919 aa24.2■■□□□ 1.46
SCARF1-208ENST00000574545 ENTPD3O75355 529 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 ALDH1A1P00352 501 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 DGKZQ13574 1117 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 TTC39AQ5SRH9 613 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 C20orf194Q5TEA3 1177 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 DCAF15Q66K64 600 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 WRNIP1Q96S55 665 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 ZNF341Q9BYN7 854 aa24.19■■□□□ 1.46
SCARF1-208ENST00000574545 CCDC8Q9H0W5 538 aaPredicted RBP24.19■■□□□ 1.46
SCARF1-208ENST00000574545 SPDYE5A6NIY4 337 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 GPR25O00155 361 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 RGS3P49796 1198 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 PDE3AQ14432 1141 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 SH3BP5LQ7L8J4 393 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 ZNF296Q8WUU4 475 aaPredicted RBP24.18■■□□□ 1.46
SCARF1-208ENST00000574545 ZKSCAN4Q969J2 545 aaPredicted RBP24.18■■□□□ 1.46
SCARF1-208ENST00000574545 DDX4Q9NQI0 724 aaKnown RBP24.18■■□□□ 1.46
SCARF1-208ENST00000574545 SNRKQ9NRH2 765 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 CSADQ9Y600 493 aa24.18■■□□□ 1.46
SCARF1-208ENST00000574545 ATRNL1Q5VV63 1379 aa24.17■■□□□ 1.46
SCARF1-208ENST00000574545 CYP2E1P05181 493 aaPredicted RBP24.17■■□□□ 1.46
SCARF1-208ENST00000574545 MAP3K10Q02779 954 aa24.17■■□□□ 1.46
SCARF1-208ENST00000574545 LDHCP07864 332 aa24.16■■□□□ 1.46
SCARF1-208ENST00000574545 INPP5BP32019 993 aa24.16■■□□□ 1.46
SCARF1-208ENST00000574545 ERC1Q8IUD2 1116 aa24.16■■□□□ 1.46
SCARF1-208ENST00000574545 RAI14Q9P0K7 980 aa24.16■■□□□ 1.46
SCARF1-208ENST00000574545 NPM3O75607 178 aaKnown RBP24.15■■□□□ 1.46
SCARF1-208ENST00000574545 GSTO1P78417 241 aa24.15■■□□□ 1.46
SCARF1-208ENST00000574545 ERO1BQ86YB8 467 aa24.15■■□□□ 1.46
SCARF1-208ENST00000574545 RHPN1Q8TCX5 695 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms