RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
USP43-205ENST00000574408 FDPSP14324 419 aaKnown RBP12.26□□□□□ -0.45
USP43-205ENST00000574408 STK11IPQ8N1F8 1099 aa12.26□□□□□ -0.45
USP43-205ENST00000574408 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
USP43-205ENST00000574408 CASZ1Q86V15 1759 aa12.26□□□□□ -0.45
USP43-205ENST00000574408 FBXO33Q7Z6M2 555 aa12.26□□□□□ -0.45
USP43-205ENST00000574408 CNBD1Q8NA66 436 aa12.26□□□□□ -0.45
USP43-205ENST00000574408 KDM4AO75164 1064 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 MSNP26038 577 aaKnown RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 TM4SF1P30408 202 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 RRP12Q5JTH9 1297 aaKnown RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 SENP2Q9HC62 589 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 ORC3Q9UBD5 711 aaPredicted RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 RXRAP19793 462 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 AKNAD1Q5T1N1 836 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 NFXL1Q6ZNB6 911 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 MFSD6Q6ZSS7 791 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 SDR42E1Q8WUS8 393 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 A0A1B0GUL6 1792 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 HIBADHP31937 336 aaKnown RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 CHAF1AQ13111 956 aaPredicted RBP12.25□□□□□ -0.45
USP43-205ENST00000574408 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 TMEM87BQ96K49 555 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 TACC3Q9Y6A5 838 aa12.25□□□□□ -0.45
USP43-205ENST00000574408 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP43-205ENST00000574408 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 C4AP0C0L4 1744 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 A0A0U1RQG5 324 aaPredicted RBP12.24□□□□□ -0.45
USP43-205ENST00000574408 IFIT3O14879 490 aaKnown RBP12.24□□□□□ -0.45
USP43-205ENST00000574408 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
USP43-205ENST00000574408 LIG1P18858 919 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 APOA5Q6Q788 366 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 CNNM2Q9H8M5 875 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 ZSWIM5Q9P217 1185 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 TRIM37O94972 964 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 ADRA2BP18089 450 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 GIMAP6Q6P9H5 292 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 C8orf76Q96K31 380 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 CFAP45Q9UL16 551 aa12.24□□□□□ -0.45
USP43-205ENST00000574408 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 SEMA3EO15041 775 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
USP43-205ENST00000574408 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
USP43-205ENST00000574408 TXNRD3Q86VQ6 643 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 IGDCC4Q8TDY8 1250 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 KRT23Q9C075 422 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 FTOQ9C0B1 505 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP43-205ENST00000574408 LY9Q9HBG7 655 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 ANKIB1Q9P2G1 1089 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 ESPNB1AK53 854 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 AEBP2Q6ZN18 517 aaPredicted RBP12.23□□□□□ -0.45
USP43-205ENST00000574408 KRT27Q7Z3Y8 459 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 RIOK1Q9BRS2 568 aaKnown RBP12.23□□□□□ -0.45
USP43-205ENST00000574408 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 R3HCC1Q9Y3T6 440 aaKnown RBP12.23□□□□□ -0.45
USP43-205ENST00000574408 ZBTB43O43298 467 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 PPARAQ07869 468 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 ZNF384Q8TF68 577 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 STAG1Q8WVM7 1258 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 PGBD1Q96JS3 809 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 PPP1R9BQ96SB3 815 aa12.23□□□□□ -0.45
USP43-205ENST00000574408 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
USP43-205ENST00000574408 GRAPQ13588 217 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
USP43-205ENST00000574408 ZKSCAN3Q9BRR0 538 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 EP400Q96L91 3159 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 GOLGA8AA7E2F4 631 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 GYS1P13807 737 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 CPLX2Q6PUV4 134 aaKnown RBP12.22□□□□□ -0.45
USP43-205ENST00000574408 USP28Q96RU2 1077 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 RNF41Q9H4P4 317 aaPredicted RBP12.22□□□□□ -0.45
USP43-205ENST00000574408 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
USP43-205ENST00000574408 CCDC69A6NI79 296 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 CDC27P30260 824 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 MECOMQ03112 1051 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 SGMS1Q86VZ5 419 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.45
USP43-205ENST00000574408 ZNF396Q96N95 335 aaPredicted RBP12.21□□□□□ -0.45
USP43-205ENST00000574408 NUP62CLQ9H1M0 184 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 DACT1Q9NYF0 836 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 PRDX5P30044 214 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 LIFRP42702 1097 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
USP43-205ENST00000574408 FBXO18Q8NFZ0 1043 aa12.21□□□□□ -0.45
USP43-205ENST00000574408 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
USP43-205ENST00000574408 SMIM22K7EJ46 135 aa12.21□□□□□ -0.46
USP43-205ENST00000574408 CDKL5O76039 1030 aa12.21□□□□□ -0.46
USP43-205ENST00000574408 SART3Q15020 963 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms