RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 GTF2A2P52657 109 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 TIMM10P62072 90 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 TCP10Q12799 353 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 CCL15Q16663 113 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 CDC42EP5Q6NZY7 148 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 BRI3BPQ8WY22 251 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 LAMB1P07942 1786 aa26.2■■□□□ 1.78
CHRNB1-206ENST00000574054 SALL1Q9NSC2 1324 aa26.19■■□□□ 1.78
CHRNB1-206ENST00000574054 TFCP2Q12800 502 aa26.19■■□□□ 1.78
CHRNB1-206ENST00000574054 ZKSCAN4Q969J2 545 aaPredicted RBP26.19■■□□□ 1.78
CHRNB1-206ENST00000574054 TRIM17Q9Y577 477 aa26.19■■□□□ 1.78
CHRNB1-206ENST00000574054 SNCAIPQ9Y6H5 919 aa26.19■■□□□ 1.78
CHRNB1-206ENST00000574054 RPAP1Q9BWH6 1393 aaPredicted RBP26.19■■□□□ 1.78
CHRNB1-206ENST00000574054 HTTP42858 3142 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 SPDYE5A6NIY4 337 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 GNAI2P04899 355 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 HNRNPUQ00839 825 aaKnown RBP eCLIP26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 MTX1Q13505 466 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 MIGA2Q7L4E1 593 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 FAM151AQ8WW52 585 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 USP40Q9NVE5 1235 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 AKAP2Q9Y2D5 859 aa26.18■■□□□ 1.78
CHRNB1-206ENST00000574054 A0A1B0GUL7 405 aa26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 RASGRF1Q13972 1273 aa26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 ERO1BQ86YB8 467 aa26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 ZGPATQ8N5A5 531 aaKnown RBP26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 CD99L2Q8TCZ2 262 aa26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 ERO1AQ96HE7 468 aa26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 ZNF341Q9BYN7 854 aa26.17■■□□□ 1.78
CHRNB1-206ENST00000574054 NFIAQ12857 509 aa26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 TAF1CQ15572 869 aaPredicted RBP26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 OTOP1Q7RTM1 612 aa26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 DZIP1Q86YF9 867 aaKnown RBP26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 MIER1Q8N108 512 aa26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 XAGE2Q96GT9 111 aa26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 ABCF2Q9UG63 623 aa26.16■■□□□ 1.78
CHRNB1-206ENST00000574054 MVPQ14764 893 aaKnown RBP26.15■■□□□ 1.78
CHRNB1-206ENST00000574054 NEUROD6Q96NK8 337 aa26.15■■□□□ 1.78
CHRNB1-206ENST00000574054 SP3Q02447 781 aa26.14■■□□□ 1.78
CHRNB1-206ENST00000574054 CETPP11597 493 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 INPP5BP32019 993 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 GORABQ5T7V8 394 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 ZKSCAN2Q63HK3 967 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 FAM43AQ8N2R8 423 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 TMEM57Q8N5G2 664 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 ZFYVE28Q9HCC9 887 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 FAM198AQ9UFP1 575 aa26.13■■□□□ 1.77
CHRNB1-206ENST00000574054 PNMA6EA0A0J9YXQ4 647 aa26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 G3BP1Q13283 466 aaKnown RBP eCLIP26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 PPIL2Q13356 520 aa26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 SNAPC2Q13487 334 aa26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 SPTY2D1Q68D10 685 aaPredicted RBP26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 EFCC1Q9HA90 598 aa26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 PDS5AQ29RF7 1337 aaKnown RBP26.12■■□□□ 1.77
CHRNB1-206ENST00000574054 PDE4DIPQ5VU43 2346 aa26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 IRF6O14896 467 aa26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 ZBTB22O15209 634 aa26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 WDHD1O75717 1129 aaPredicted RBP26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 DIEXFQ68CQ4 756 aaKnown RBP26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 SLF2Q8IX21 1173 aa26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 AK9Q5TCS8 1911 aa26.11■■□□□ 1.77
CHRNB1-206ENST00000574054 RGS3P49796 1198 aa26.1■■□□□ 1.77
CHRNB1-206ENST00000574054 ZFPM1Q8IX07 1006 aa26.1■■□□□ 1.77
CHRNB1-206ENST00000574054 GAKO14976 1311 aa26.1■■□□□ 1.77
CHRNB1-206ENST00000574054 MYH2Q9UKX2 1941 aa26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 BTBD19C9JJ37 291 aa26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 PPATQ06203 517 aa26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 ERICH6Q7L0X2 663 aa26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 ZSCAN29Q8IWY8 852 aaPredicted RBP26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 FTSJ3Q8IY81 847 aaKnown RBP26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 ZNF112Q9UJU3 913 aa26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 PTPN22Q9Y2R2 807 aa26.08■■□□□ 1.77
CHRNB1-206ENST00000574054 BTDP43251 543 aa26.07■■□□□ 1.76
CHRNB1-206ENST00000574054 HMG20BQ9P0W2 317 aa26.07■■□□□ 1.76
CHRNB1-206ENST00000574054 CENPFP49454 3210 aa26.07■■□□□ 1.76
CHRNB1-206ENST00000574054 ENTPD3O75355 529 aa26.06■■□□□ 1.76
CHRNB1-206ENST00000574054 MECOMQ03112 1051 aa26.06■■□□□ 1.76
CHRNB1-206ENST00000574054 PI16Q6UXB8 463 aa26.06■■□□□ 1.76
CHRNB1-206ENST00000574054 IDI2Q9BXS1 227 aa26.06■■□□□ 1.76
CHRNB1-206ENST00000574054 MROH7-TTC4A0A0A0MT08 1334 aa26.06■■□□□ 1.76
CHRNB1-206ENST00000574054 CAP1Q01518 475 aa26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 OS9Q13438 667 aaPredicted RBP26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 PICALMQ13492 652 aa26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 ARHGEF6Q15052 776 aa26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 SPATA5Q8NB90 893 aa26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 FAM163AQ96GL9 167 aaPredicted RBP26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 ZCCHC17Q9NP64 241 aaKnown RBP26.05■■□□□ 1.76
CHRNB1-206ENST00000574054 NOL9Q5SY16 702 aaKnown RBP26.04■■□□□ 1.76
CHRNB1-206ENST00000574054 TBC1D9Q6ZT07 1266 aa26.04■■□□□ 1.76
CHRNB1-206ENST00000574054 ITPRIPQ8IWB1 547 aa26.04■■□□□ 1.76
CHRNB1-206ENST00000574054 C1orf115Q9H7X2 142 aa26.04■■□□□ 1.76
CHRNB1-206ENST00000574054 TLR2O60603 784 aa26.03■■□□□ 1.76
CHRNB1-206ENST00000574054 ARID4AP29374 1257 aaPredicted RBP26.03■■□□□ 1.76
CHRNB1-206ENST00000574054 DDX4Q9NQI0 724 aaKnown RBP26.03■■□□□ 1.76
CHRNB1-206ENST00000574054 RAI14Q9P0K7 980 aa26.03■■□□□ 1.76
CHRNB1-206ENST00000574054 RFX7Q2KHR2 1363 aa26.03■■□□□ 1.76
CHRNB1-206ENST00000574054 GSTO1P78417 241 aa26.02■■□□□ 1.76
CHRNB1-206ENST00000574054 POLA2Q14181 598 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms