RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 CCL15Q16663 113 aa24.02■■□□□ 1.44
HCFC1R1-204ENST00000573095 DCAF15Q66K64 600 aa24.02■■□□□ 1.44
HCFC1R1-204ENST00000573095 OTOP1Q7RTM1 612 aa24.02■■□□□ 1.44
HCFC1R1-204ENST00000573095 TRIM17Q9Y577 477 aa24.02■■□□□ 1.44
HCFC1R1-204ENST00000573095 TNRC18O15417 2968 aaPredicted RBP24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 TRIM27P14373 513 aa24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 ADORA1P30542 326 aa24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 CDC42EP5Q6NZY7 148 aa24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 ERO1BQ86YB8 467 aa24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 FAM151AQ8WW52 585 aa24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 AK9Q5TCS8 1911 aa24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 PDS5AQ29RF7 1337 aaKnown RBP24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 RBBP6Q7Z6E9 1792 aaKnown RBP24.01■■□□□ 1.43
HCFC1R1-204ENST00000573095 SRGAP3O43295 1099 aa24■■□□□ 1.43
HCFC1R1-204ENST00000573095 CCDC102BQ68D86 513 aa24■■□□□ 1.43
HCFC1R1-204ENST00000573095 ZGPATQ8N5A5 531 aaKnown RBP24■■□□□ 1.43
HCFC1R1-204ENST00000573095 IPO8O15397 1037 aaKnown RBP23.99■■□□□ 1.43
HCFC1R1-204ENST00000573095 ATF7IPQ6VMQ6 1270 aa23.99■■□□□ 1.43
HCFC1R1-204ENST00000573095 CD99L2Q8TCZ2 262 aa23.99■■□□□ 1.43
HCFC1R1-204ENST00000573095 ZNF341Q9BYN7 854 aa23.99■■□□□ 1.43
HCFC1R1-204ENST00000573095 HTTP42858 3142 aa23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 SP3Q02447 781 aa23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 NFIAQ12857 509 aa23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 PPIL2Q13356 520 aa23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 TAF1CQ15572 869 aaPredicted RBP23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 ZKSCAN4Q969J2 545 aaPredicted RBP23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 RFX7Q2KHR2 1363 aa23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 PDE4DIPQ5VU43 2346 aa23.98■■□□□ 1.43
HCFC1R1-204ENST00000573095 A0A1B0GUL7 405 aa23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 GAKO14976 1311 aa23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 RASGRF1Q13972 1273 aa23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 FAM43AQ8N2R8 423 aa23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 ZFYVE28Q9HCC9 887 aa23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 ZCCHC17Q9NP64 241 aaKnown RBP23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 AKAP2Q9Y2D5 859 aa23.97■■□□□ 1.43
HCFC1R1-204ENST00000573095 CETPP11597 493 aa23.96■■□□□ 1.43
HCFC1R1-204ENST00000573095 TCP10Q12799 353 aa23.96■■□□□ 1.43
HCFC1R1-204ENST00000573095 FAM198AQ9UFP1 575 aa23.96■■□□□ 1.43
HCFC1R1-204ENST00000573095 TNNQ9UQP3 1299 aa23.96■■□□□ 1.43
HCFC1R1-204ENST00000573095 IRF6O14896 467 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 BCAR3O75815 825 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 TIMM10P62072 90 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 PPATQ06203 517 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 TFCP2Q12800 502 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 SNAPC2Q13487 334 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 MVPQ14764 893 aaKnown RBP23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 MIGA2Q7L4E1 593 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 EFCC1Q9HA90 598 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 USP40Q9NVE5 1235 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 ZNF112Q9UJU3 913 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 PTPN22Q9Y2R2 807 aa23.95■■□□□ 1.42
HCFC1R1-204ENST00000573095 ATRNL1Q5VV63 1379 aa23.94■■□□□ 1.42
HCFC1R1-204ENST00000573095 GNAI2P04899 355 aa23.94■■□□□ 1.42
HCFC1R1-204ENST00000573095 INPP5BP32019 993 aa23.94■■□□□ 1.42
HCFC1R1-204ENST00000573095 CAP1Q01518 475 aa23.94■■□□□ 1.42
HCFC1R1-204ENST00000573095 FRAT1Q92837 279 aaPredicted RBP23.94■■□□□ 1.42
HCFC1R1-204ENST00000573095 XAGE2Q96GT9 111 aa23.94■■□□□ 1.42
HCFC1R1-204ENST00000573095 DZIP1Q86YF9 867 aaKnown RBP23.93■■□□□ 1.42
HCFC1R1-204ENST00000573095 IDI2Q9BXS1 227 aa23.93■■□□□ 1.42
HCFC1R1-204ENST00000573095 ZSWIM8A7E2V4 1837 aa23.92■■□□□ 1.42
HCFC1R1-204ENST00000573095 BTBD19C9JJ37 291 aa23.92■■□□□ 1.42
HCFC1R1-204ENST00000573095 WDHD1O75717 1129 aaPredicted RBP23.92■■□□□ 1.42
HCFC1R1-204ENST00000573095 NOL9Q5SY16 702 aaKnown RBP23.92■■□□□ 1.42
HCFC1R1-204ENST00000573095 SLF2Q8IX21 1173 aa23.92■■□□□ 1.42
HCFC1R1-204ENST00000573095 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.92■■□□□ 1.42
HCFC1R1-204ENST00000573095 ENTPD3O75355 529 aa23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 SPTY2D1Q68D10 685 aaPredicted RBP23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 CLUAP1Q96AJ1 413 aa23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 FAM163AQ96GL9 167 aaPredicted RBP23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 ABCF2Q9UG63 623 aa23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 KCNH4Q9UQ05 1017 aa23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 MAST2Q6P0Q8 1798 aa23.91■■□□□ 1.42
HCFC1R1-204ENST00000573095 DOCK1Q14185 1865 aa23.9■■□□□ 1.42
HCFC1R1-204ENST00000573095 PNMA6EA0A0J9YXQ4 647 aa23.9■■□□□ 1.42
HCFC1R1-204ENST00000573095 TLR2O60603 784 aa23.9■■□□□ 1.42
HCFC1R1-204ENST00000573095 RGS3P49796 1198 aa23.9■■□□□ 1.42
HCFC1R1-204ENST00000573095 ARMC5Q96C12 935 aa23.9■■□□□ 1.42
HCFC1R1-204ENST00000573095 MROH7-TTC4A0A0A0MT08 1334 aa23.89■■□□□ 1.42
HCFC1R1-204ENST00000573095 ARHGEF6Q15052 776 aa23.89■■□□□ 1.41
HCFC1R1-204ENST00000573095 ZKSCAN2Q63HK3 967 aa23.89■■□□□ 1.41
HCFC1R1-204ENST00000573095 ZFPM1Q8IX07 1006 aa23.89■■□□□ 1.41
HCFC1R1-204ENST00000573095 TMEM57Q8N5G2 664 aa23.89■■□□□ 1.41
HCFC1R1-204ENST00000573095 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.89■■□□□ 1.41
HCFC1R1-204ENST00000573095 BTDP43251 543 aa23.88■■□□□ 1.41
HCFC1R1-204ENST00000573095 NEUROD6Q96NK8 337 aa23.88■■□□□ 1.41
HCFC1R1-204ENST00000573095 PTPRFP10586 1907 aa23.88■■□□□ 1.41
HCFC1R1-204ENST00000573095 ARID4AP29374 1257 aaPredicted RBP23.87■■□□□ 1.41
HCFC1R1-204ENST00000573095 ERICH6Q7L0X2 663 aa23.87■■□□□ 1.41
HCFC1R1-204ENST00000573095 ANKRD23Q86SG2 305 aa23.87■■□□□ 1.41
HCFC1R1-204ENST00000573095 HMG20BQ9P0W2 317 aa23.87■■□□□ 1.41
HCFC1R1-204ENST00000573095 PHIPQ8WWQ0 1821 aa23.87■■□□□ 1.41
HCFC1R1-204ENST00000573095 MECOMQ03112 1051 aa23.86■■□□□ 1.41
HCFC1R1-204ENST00000573095 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.41
HCFC1R1-204ENST00000573095 PRPF38BQ5VTL8 546 aaKnown RBP23.86■■□□□ 1.41
HCFC1R1-204ENST00000573095 GPR75-ASB3A0A0A6YYF3 556 aa23.85■■□□□ 1.41
HCFC1R1-204ENST00000573095 PHF20L1A8MW92 1017 aa23.85■■□□□ 1.41
HCFC1R1-204ENST00000573095 SLC34A2O95436 690 aa23.85■■□□□ 1.41
HCFC1R1-204ENST00000573095 LACTBP83111 547 aaPredicted RBP23.85■■□□□ 1.41
HCFC1R1-204ENST00000573095 HNRNPUQ00839 825 aaKnown RBP eCLIP23.85■■□□□ 1.41
HCFC1R1-204ENST00000573095 MAP3K10Q02779 954 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms