RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
NPLOC4-210ENST00000572824 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-210ENST00000572824 EXOSC9Q06265 439 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-210ENST00000572824 FLIIQ13045 1269 aa11.84□□□□□ -0.51
NPLOC4-210ENST00000572824 CCDC27Q2M243 656 aa11.84□□□□□ -0.51
NPLOC4-210ENST00000572824 NYAP1Q6ZVC0 841 aa11.84□□□□□ -0.51
NPLOC4-210ENST00000572824 H7C1D1 291 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 LILRB3O75022 631 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 VIL1P09327 827 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 QPCTQ16769 361 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 PRAMEF18Q5VWM3 479 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 PPP2R2DQ66LE6 453 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 MOB2Q70IA6 237 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 EYA3Q99504 573 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 MINPP1Q9UNW1 487 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 AKAP11Q9UKA4 1901 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 XDHP47989 1333 aa11.83□□□□□ -0.52
NPLOC4-210ENST00000572824 H7C1W4 665 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 VAMP4O75379 141 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 HUNKP57058 714 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 GCKRQ14397 625 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 ANGEL2Q5VTE6 544 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 PRPF38BQ5VTL8 546 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 DPF2Q92785 391 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 GMLQ99445 158 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 STK31Q9BXU1 1019 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 PCDHAC2Q9Y5I4 1007 aa11.82□□□□□ -0.52
NPLOC4-210ENST00000572824 ECM29Q5VYK3 1845 aa11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 ZNF609O15014 1411 aa11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 FAM155AB1AL88 458 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 CDCA5Q96FF9 252 aa11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 AOX1Q06278 1338 aa11.81□□□□□ -0.52
NPLOC4-210ENST00000572824 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 PAPPA2Q9BXP8 1791 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 SASH1O94885 1247 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 ITGA6P23229 1130 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 ZNF280AP59817 542 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 SCARF1Q14162 830 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 DNAAF4Q8WXU2 420 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 ABHD8Q96I13 439 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 ZNF594Q96JF6 807 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 JAG2Q9Y219 1238 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 IL16Q14005 1332 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
NPLOC4-210ENST00000572824 OTOFQ9HC10 1997 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 TAF5LO75529 589 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 RFC5P40937 340 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 ECE1P42892 770 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 CCT4P50991 539 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 DACT2Q5SW24 774 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 MYOZ2Q9NPC6 264 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 BSDC1Q9NW68 430 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 ARAP2Q8WZ64 1704 aa11.79□□□□□ -0.52
NPLOC4-210ENST00000572824 ATP2B4P23634 1241 aa11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 FOXO4P98177 505 aa11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 SCUBE3Q8IX30 993 aa11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 PLA2G12BQ9BX93 195 aa11.78□□□□□ -0.52
NPLOC4-210ENST00000572824 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 ANP32CO43423 234 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 NR1I2O75469 434 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 CSF1RP07333 972 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 USP17L8P0C7I0 530 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 CHRNDQ07001 517 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 MTMR2Q13614 643 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 CERS5Q8N5B7 392 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
NPLOC4-210ENST00000572824 KIF23Q02241 960 aaPredicted RBP11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 Q3C1V9 767 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 RGMBQ6NW40 437 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 RASAL3Q86YV0 1011 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 KIAA0825Q8IV33 1275 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 AGBL3Q8NEM8 1001 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 LINS1Q8NG48 757 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 889.4 ms