RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 UBTFL1P0CB47 393 aaPredicted RBP10.42□□□□□ -0.74
TVP23A-205ENST00000572428 PEX19P40855 299 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
TVP23A-205ENST00000572428 TXNRD1Q16881 649 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 RABL6Q3YEC7 729 aaPredicted RBP10.42□□□□□ -0.74
TVP23A-205ENST00000572428 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
TVP23A-205ENST00000572428 PAGR1Q9BTK6 254 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 ITM2BQ9Y287 266 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 SEC24BO95487 1268 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 HLFQ16534 295 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 FXNQ16595 210 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 L1TD1Q5T7N2 865 aaKnown RBP10.41□□□□□ -0.74
TVP23A-205ENST00000572428 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 SSH3Q8TE77 659 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 GIPC2Q8TF65 315 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 CCDC47Q96A33 483 aaKnown RBP10.41□□□□□ -0.74
TVP23A-205ENST00000572428 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 DCTPP1Q9H773 170 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 NARFQ9UHQ1 456 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 BMP2KLQ5H9B9 411 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 ANKRD18BA2A2Z9 1011 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 PPFIA2O75334 1257 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 ATP2B3Q16720 1220 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 ZSCAN30Q86W11 494 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 ZBTB3Q9H5J0 574 aa10.41□□□□□ -0.74
TVP23A-205ENST00000572428 CCDC66A2RUB6 948 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 PCCAP05165 728 aaPredicted RBP10.4□□□□□ -0.74
TVP23A-205ENST00000572428 INF2Q27J81 1249 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 KANK3Q6NY19 840 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 ZNF512BQ96KM6 892 aaPredicted RBP10.4□□□□□ -0.74
TVP23A-205ENST00000572428 AGAP3Q96P47 875 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 CAMKK2Q96RR4 588 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 LNPKQ9C0E8 428 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 LRRFIP2Q9Y608 721 aaKnown RBP10.4□□□□□ -0.74
TVP23A-205ENST00000572428 MAGEA8P43361 318 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 MYSM1Q5VVJ2 828 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 SAPCD2Q86UD0 394 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 NLRP10Q86W26 655 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 PDILTQ8N807 584 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 RPS6KC1Q96S38 1066 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
TVP23A-205ENST00000572428 N6AMT1Q9Y5N5 214 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 RIC1Q4ADV7 1423 aa10.4□□□□□ -0.74
TVP23A-205ENST00000572428 UBN2Q6ZU65 1347 aa10.4□□□□□ -0.75
TVP23A-205ENST00000572428 TTC19Q6DKK2 380 aaPredicted RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 ZBTB38Q8NAP3 1195 aaPredicted RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 SENP7Q9BQF6 1050 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 C9orf78Q9NZ63 289 aaPredicted RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 RTCBQ9Y3I0 505 aaKnown RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 USP42Q9H9J4 1324 aaKnown RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 TRIM64CA6NLI5 447 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 KINO60870 393 aaKnown RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 APBA3O96018 575 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 SUCLG2Q96I99 432 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 FSD2A1L4K1 749 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 DYTNA2CJ06 578 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 POM121CA8CG34 1229 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 HMMRO75330 724 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 KCNQ4P56696 695 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 SMCR8Q8TEV9 937 aaPredicted RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 THOC1Q96FV9 657 aaKnown RBP10.39□□□□□ -0.75
TVP23A-205ENST00000572428 TMEM63CQ9P1W3 806 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 ARAP2Q8WZ64 1704 aa10.39□□□□□ -0.75
TVP23A-205ENST00000572428 FOXO4P98177 505 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 ARMC3Q5W041 872 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 CENPOQ9BU64 300 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.38□□□□□ -0.75
TVP23A-205ENST00000572428 SPEF2Q9C093 1822 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 ATP5J2-PTCD1G3V325 749 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 GNPATO15228 680 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 OFD1O75665 1012 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 KIF2CQ99661 725 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 BLOC1S6Q9UL45 172 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 SLC45A1Q9Y2W3 748 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 HMGB1P1B2RPK0 211 aaPredicted RBP10.38□□□□□ -0.75
TVP23A-205ENST00000572428 ALDH1B1P30837 517 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 ZCCHC8Q6NZY4 707 aaKnown RBP10.38□□□□□ -0.75
TVP23A-205ENST00000572428 SPACA7Q96KW9 195 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 GINM1Q9NU53 330 aa10.38□□□□□ -0.75
TVP23A-205ENST00000572428 TNRC6CQ9HCJ0 1690 aaKnown RBP10.38□□□□□ -0.75
TVP23A-205ENST00000572428 ANKRD31Q8N7Z5 1873 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 VDRP11473 427 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 DHX38Q92620 1227 aaKnown RBP10.37□□□□□ -0.75
TVP23A-205ENST00000572428 TATDN2Q93075 761 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 IP6K2Q9UHH9 426 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 UQCRHLA0A096LP55 91 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 CSF1RP07333 972 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 UQCRHP07919 91 aa10.37□□□□□ -0.75
TVP23A-205ENST00000572428 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms