RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 APOBEC3HQ6NTF7 200 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 CWC27Q6UX04 472 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 CERS3Q8IU89 383 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 MTMR14Q8NCE2 650 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 ZNF384Q8TF68 577 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 PRMT6Q96LA8 375 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 VEZTQ9HBM0 779 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 USP40Q9NVE5 1235 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 UTRNP46939 3433 aa11.37□□□□□ -0.59
NPLOC4-208ENST00000572351 GPR75-ASB3A0A0A6YYF3 556 aa11.36□□□□□ -0.59
NPLOC4-208ENST00000572351 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
NPLOC4-208ENST00000572351 ABCB7O75027 752 aa11.36□□□□□ -0.59
NPLOC4-208ENST00000572351 CDC45O75419 566 aa11.36□□□□□ -0.59
NPLOC4-208ENST00000572351 NMIQ13287 307 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-208ENST00000572351 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-208ENST00000572351 POTECB2RU33 542 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 USP5P45974 858 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 PPP4CP60510 307 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 DYNLL1P63167 89 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 ZMYM1Q5SVZ6 1142 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 ANGEL2Q5VTE6 544 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 CDC42EP5Q6NZY7 148 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 TEX11Q8IYF3 940 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 SH3RF3Q8TEJ3 882 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 RUFY2Q8WXA3 655 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 FAM227BQ96M60 508 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 ARMT1Q9H993 441 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 HELLSQ9NRZ9 838 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 GGA3Q9NZ52 723 aa11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-208ENST00000572351 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 A0A0D9SFI3 127 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 M0R2C6 588 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 GPAA1O43292 621 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 CHMLP26374 656 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 TNNI2P48788 182 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 HIRAP54198 1017 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 CACNB3P54284 484 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 MFAP1P55081 439 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 PICALMQ13492 652 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 MCMDC2Q4G0Z9 681 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 APOBEC3FQ8IUX4 373 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 OSBP2Q969R2 916 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 DDRGK1Q96HY6 314 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 ZBED3Q96IU2 234 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 CRNKL1Q9BZJ0 848 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 SLC4A4Q9Y6R1 1079 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 SBF1O95248 1867 aa11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 ASTN2O75129 1339 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-208ENST00000572351 TCP10L2B9ZVM9 353 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 APPP05067 770 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 GNAT2P19087 354 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 DSG3P32926 999 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 ZNF784Q8NCA9 323 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 RAD50Q92878 1312 aa11.33□□□□□ -0.6
NPLOC4-208ENST00000572351 RHBDL3P58872 404 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 TCP10Q12799 353 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 CCDC129Q6ZRS4 1044 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 MAPKAPK5Q8IW41 473 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 ZSCAN29Q8IWY8 852 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 STRBPQ96SI9 672 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 NACAP1Q9BZK3 213 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 DICER1Q9UPY3 1922 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
NPLOC4-208ENST00000572351 PRKAB2O43741 272 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 WDHD1O75717 1129 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 NFIAQ12857 509 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 AMOTL1Q8IY63 956 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 SDR42E1Q8WUS8 393 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 SCAF8Q9UPN6 1271 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 FLT1P17948 1338 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
NPLOC4-208ENST00000572351 ENTPD3O75355 529 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 TDO2P48775 406 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 RASA3Q14644 834 aa11.3□□□□□ -0.6
NPLOC4-208ENST00000572351 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms