RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
CIITA-207ENST00000571545 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
CIITA-207ENST00000571545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.05□□□□□ -0.48
CIITA-207ENST00000571545 OPTNQ96CV9 577 aa12.05□□□□□ -0.48
CIITA-207ENST00000571545 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
CIITA-207ENST00000571545 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
CIITA-207ENST00000571545 MYH2Q9UKX2 1941 aa12.05□□□□□ -0.48
CIITA-207ENST00000571545 AOX1Q06278 1338 aa12.05□□□□□ -0.48
CIITA-207ENST00000571545 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
CIITA-207ENST00000571545 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 GRIK5Q16478 980 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 ERO1AQ96HE7 468 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 ELP3Q9H9T3 547 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 ZCCHC17Q9NP64 241 aaKnown RBP12.04□□□□□ -0.48
CIITA-207ENST00000571545 FZD1Q9UP38 647 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
CIITA-207ENST00000571545 ZBED9Q6R2W3 1325 aa12.04□□□□□ -0.48
CIITA-207ENST00000571545 DOCK2Q92608 1830 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 A0A1B0GUL7 405 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 SPDYE5A6NIY4 337 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 PRDX5P30044 214 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 PHKA1P46020 1223 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 G3BP1Q13283 466 aaKnown RBP eCLIP12.03□□□□□ -0.48
CIITA-207ENST00000571545 VGLL4Q14135 290 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 FBXO46Q6PJ61 603 aaPredicted RBP12.03□□□□□ -0.48
CIITA-207ENST00000571545 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 FAM151AQ8WW52 585 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 WRNIP1Q96S55 665 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 DAGLAQ9Y4D2 1042 aa12.03□□□□□ -0.48
CIITA-207ENST00000571545 IGSF3O75054 1194 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 BCAR3O75815 825 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
CIITA-207ENST00000571545 CETPP11597 493 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 CACNB3P54284 484 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 RASGRF1Q13972 1273 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 GORABQ5T7V8 394 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.49
CIITA-207ENST00000571545 CLUAP1Q96AJ1 413 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
CIITA-207ENST00000571545 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
CIITA-207ENST00000571545 IGF2BP3O00425 579 aaKnown RBP eCLIP12.01□□□□□ -0.49
CIITA-207ENST00000571545 UQCRFS1P1P0C7P4 283 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 MS4A1P11836 297 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 GSTO1P78417 241 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 TFCP2Q12800 502 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 SNAPC2Q13487 334 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 CDC42EP5Q6NZY7 148 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 MIER1Q8N108 512 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
CIITA-207ENST00000571545 XAGE2Q96GT9 111 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 ZFYVE28Q9HCC9 887 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 ABCF2Q9UG63 623 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 HPS5Q9UPZ3 1129 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 GAKO14976 1311 aa12.01□□□□□ -0.49
CIITA-207ENST00000571545 MAST2Q6P0Q8 1798 aa12□□□□□ -0.49
CIITA-207ENST00000571545 CCL15-CCL14A0A0B4J2E2 113 aa12□□□□□ -0.49
CIITA-207ENST00000571545 ENTPD3O75355 529 aa12□□□□□ -0.49
CIITA-207ENST00000571545 LDHCP07864 332 aa12□□□□□ -0.49
CIITA-207ENST00000571545 ADORA1P30542 326 aa12□□□□□ -0.49
CIITA-207ENST00000571545 GJA5P36382 358 aa12□□□□□ -0.49
CIITA-207ENST00000571545 PPATQ06203 517 aa12□□□□□ -0.49
CIITA-207ENST00000571545 CRHR2Q13324 411 aa12□□□□□ -0.49
CIITA-207ENST00000571545 PPIL2Q13356 520 aa12□□□□□ -0.49
CIITA-207ENST00000571545 OS9Q13438 667 aaPredicted RBP12□□□□□ -0.49
CIITA-207ENST00000571545 TAF1CQ15572 869 aaPredicted RBP12□□□□□ -0.49
CIITA-207ENST00000571545 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
CIITA-207ENST00000571545 CCL15Q16663 113 aa12□□□□□ -0.49
CIITA-207ENST00000571545 ERICH6Q7L0X2 663 aa12□□□□□ -0.49
CIITA-207ENST00000571545 TMEM57Q8N5G2 664 aa12□□□□□ -0.49
CIITA-207ENST00000571545 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
CIITA-207ENST00000571545 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
CIITA-207ENST00000571545 IDI2Q9BXS1 227 aa12□□□□□ -0.49
CIITA-207ENST00000571545 GPR108Q9NPR9 543 aa12□□□□□ -0.49
CIITA-207ENST00000571545 USP40Q9NVE5 1235 aa12□□□□□ -0.49
CIITA-207ENST00000571545 SNCAIPQ9Y6H5 919 aa12□□□□□ -0.49
CIITA-207ENST00000571545 ARID4AP29374 1257 aaPredicted RBP11.99□□□□□ -0.49
CIITA-207ENST00000571545 TIMM10P62072 90 aa11.99□□□□□ -0.49
CIITA-207ENST00000571545 SP3Q02447 781 aa11.99□□□□□ -0.49
CIITA-207ENST00000571545 ITPRIPQ8IWB1 547 aa11.99□□□□□ -0.49
CIITA-207ENST00000571545 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
CIITA-207ENST00000571545 NOL10Q9BSC4 688 aaKnown RBP11.99□□□□□ -0.49
CIITA-207ENST00000571545 MROH7-TTC4A0A0A0MT08 1334 aa11.99□□□□□ -0.49
CIITA-207ENST00000571545 COL2A1P02458 1487 aaPredicted RBP11.98□□□□□ -0.49
CIITA-207ENST00000571545 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 PNMA6EA0A0J9YXQ4 647 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 TCP10Q12799 353 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 KIF22Q14807 665 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 NOL9Q5SY16 702 aaKnown RBP11.98□□□□□ -0.49
CIITA-207ENST00000571545 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 BRI3BPQ8WY22 251 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 TRIM17Q9Y577 477 aa11.98□□□□□ -0.49
CIITA-207ENST00000571545 GNRH1P01148 92 aa11.97□□□□□ -0.49
CIITA-207ENST00000571545 PLCG2P16885 1265 aa11.97□□□□□ -0.49
CIITA-207ENST00000571545 BTDP43251 543 aa11.97□□□□□ -0.49
CIITA-207ENST00000571545 OTOP1Q7RTM1 612 aa11.97□□□□□ -0.49
CIITA-207ENST00000571545 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
CIITA-207ENST00000571545 SSH3Q8TE77 659 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms