RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 ANKRD44Q8N8A2 993 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 KLHDC4Q8TBB5 520 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 ZCCHC17Q9NP64 241 aaKnown RBP17.95■□□□□ 0.46
CIITA-205ENST00000571186 MAST3O60307 1309 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 TRIOBPQ9H2D6 2365 aa17.94■□□□□ 0.46
CIITA-205ENST00000571186 PPIL2Q13356 520 aa17.94■□□□□ 0.46
CIITA-205ENST00000571186 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
CIITA-205ENST00000571186 IFIT1P09914 478 aaKnown RBP17.93■□□□□ 0.46
CIITA-205ENST00000571186 HHIPL2Q6UWX4 724 aa17.93■□□□□ 0.46
CIITA-205ENST00000571186 ZNF341Q9BYN7 854 aa17.93■□□□□ 0.46
CIITA-205ENST00000571186 GNRH1P01148 92 aa17.92■□□□□ 0.46
CIITA-205ENST00000571186 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
CIITA-205ENST00000571186 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
CIITA-205ENST00000571186 COLQQ9Y215 455 aaPredicted RBP17.92■□□□□ 0.46
CIITA-205ENST00000571186 INPP5BP32019 993 aa17.91■□□□□ 0.46
CIITA-205ENST00000571186 PRMT2P55345 433 aa17.91■□□□□ 0.46
CIITA-205ENST00000571186 PPATQ06203 517 aa17.91■□□□□ 0.46
CIITA-205ENST00000571186 TCP10Q12799 353 aa17.91■□□□□ 0.46
CIITA-205ENST00000571186 TRMT2AQ8IZ69 625 aaKnown RBP17.91■□□□□ 0.46
CIITA-205ENST00000571186 MRPL50Q8N5N7 158 aaKnown RBP17.91■□□□□ 0.46
CIITA-205ENST00000571186 WDR66Q8TBY9 1149 aa17.91■□□□□ 0.46
CIITA-205ENST00000571186 CPA4Q9UI42 421 aa17.91■□□□□ 0.46
CIITA-205ENST00000571186 SLC5A1P13866 664 aa17.9■□□□□ 0.46
CIITA-205ENST00000571186 FGFR2P21802 821 aa17.9■□□□□ 0.46
CIITA-205ENST00000571186 PSMC4P43686 418 aa17.9■□□□□ 0.46
CIITA-205ENST00000571186 FXR1P51114 621 aaKnown RBP eCLIP17.9■□□□□ 0.46
CIITA-205ENST00000571186 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
CIITA-205ENST00000571186 C17orf99Q6UX52 265 aa17.9■□□□□ 0.46
CIITA-205ENST00000571186 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
CIITA-205ENST00000571186 USP44Q9H0E7 712 aa17.9■□□□□ 0.46
CIITA-205ENST00000571186 PDHXO00330 501 aa17.89■□□□□ 0.45
CIITA-205ENST00000571186 HOXD10P28358 340 aa17.89■□□□□ 0.45
CIITA-205ENST00000571186 KIF16BQ96L93 1317 aa17.89■□□□□ 0.45
CIITA-205ENST00000571186 RPAP1Q9BWH6 1393 aaPredicted RBP17.89■□□□□ 0.45
CIITA-205ENST00000571186 MGAMO43451 1857 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 H0YGN5 161 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 EYA2O00167 538 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 FMNL1O95466 1100 aaPredicted RBP17.88■□□□□ 0.45
CIITA-205ENST00000571186 MTFR1Q15390 333 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 CDC42EP5Q6NZY7 148 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 ANKRD23Q86SG2 305 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 LPIN2Q92539 896 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 TRIM47Q96LD4 638 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 SRRDQ9UH36 339 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 PTPRCP08575 1304 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 MYH2Q9UKX2 1941 aa17.88■□□□□ 0.45
CIITA-205ENST00000571186 CTGFP29279 349 aa17.87■□□□□ 0.45
CIITA-205ENST00000571186 DIXDC1Q155Q3 683 aa17.87■□□□□ 0.45
CIITA-205ENST00000571186 RAET1EQ8TD07 263 aa17.87■□□□□ 0.45
CIITA-205ENST00000571186 ZNF112Q9UJU3 913 aa17.87■□□□□ 0.45
CIITA-205ENST00000571186 DAGLAQ9Y4D2 1042 aa17.87■□□□□ 0.45
CIITA-205ENST00000571186 OSBPP22059 807 aa17.86■□□□□ 0.45
CIITA-205ENST00000571186 NFIAQ12857 509 aa17.86■□□□□ 0.45
CIITA-205ENST00000571186 DPF3Q92784 378 aa17.86■□□□□ 0.45
CIITA-205ENST00000571186 USP40Q9NVE5 1235 aa17.86■□□□□ 0.45
CIITA-205ENST00000571186 BIN2Q9UBW5 565 aaPredicted RBP17.86■□□□□ 0.45
CIITA-205ENST00000571186 KCNH4Q9UQ05 1017 aa17.86■□□□□ 0.45
CIITA-205ENST00000571186 LDHBP07195 334 aaKnown RBP17.85■□□□□ 0.45
CIITA-205ENST00000571186 GRK4P32298 578 aa17.85■□□□□ 0.45
CIITA-205ENST00000571186 RFX5P48382 616 aaPredicted RBP17.85■□□□□ 0.45
CIITA-205ENST00000571186 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
CIITA-205ENST00000571186 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 MYPNQ86TC9 1320 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 PRDX5P30044 214 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 SIL1Q9H173 461 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 GNL3LQ9NVN8 582 aaKnown RBP17.84■□□□□ 0.45
CIITA-205ENST00000571186 CEP126Q9P2H0 1117 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 FAM198AQ9UFP1 575 aa17.84■□□□□ 0.45
CIITA-205ENST00000571186 CXCL11O14625 94 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 CCL5P13501 91 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 MOGSQ13724 837 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 ATP2B3Q16720 1220 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 NOL9Q5SY16 702 aaKnown RBP17.83■□□□□ 0.44
CIITA-205ENST00000571186 ZFPM1Q8IX07 1006 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 NKX2-3Q8TAU0 364 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 SHISA4Q96DD7 197 aa17.83■□□□□ 0.44
CIITA-205ENST00000571186 ADGRA2Q96PE1 1338 aa17.82■□□□□ 0.44
CIITA-205ENST00000571186 GPAT2Q6NUI2 795 aa17.82■□□□□ 0.44
CIITA-205ENST00000571186 PARK7Q99497 189 aaKnown RBP17.82■□□□□ 0.44
CIITA-205ENST00000571186 RNF208Q9H0X6 261 aa17.82■□□□□ 0.44
CIITA-205ENST00000571186 DOCK2Q92608 1830 aa17.82■□□□□ 0.44
CIITA-205ENST00000571186 SZT2Q5T011 3432 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 GJB1P08034 283 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 CYP2C8P10632 490 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 FCGRTP55899 365 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 UBXN2AP68543 259 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 CHRDL2Q6WN34 429 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 PICK1Q9NRD5 415 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 DENND2AQ9ULE3 1009 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 ZHX2Q9Y6X8 837 aa17.81■□□□□ 0.44
CIITA-205ENST00000571186 RANBP2P49792 3224 aaKnown RBP17.81■□□□□ 0.44
CIITA-205ENST00000571186 BCRP11274 1271 aa17.8■□□□□ 0.44
CIITA-205ENST00000571186 PHKA1P46020 1223 aa17.8■□□□□ 0.44
CIITA-205ENST00000571186 GJA8P48165 433 aa17.8■□□□□ 0.44
CIITA-205ENST00000571186 PRKCZQ05513 592 aa17.8■□□□□ 0.44
CIITA-205ENST00000571186 GADL1Q6ZQY3 521 aa17.8■□□□□ 0.44
CIITA-205ENST00000571186 FASTKD5Q7L8L6 764 aaKnown RBP17.8■□□□□ 0.44
CIITA-205ENST00000571186 ZSCAN29Q8IWY8 852 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms