RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 VPS37DQ86XT2 251 aa11.39□□□□□ -0.59
USP43-203ENST00000570827 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
USP43-203ENST00000570827 DRC1Q96MC2 740 aa11.39□□□□□ -0.59
USP43-203ENST00000570827 PARD6BQ9BYG5 372 aa11.39□□□□□ -0.59
USP43-203ENST00000570827 TMEM51Q9NW97 253 aa11.39□□□□□ -0.59
USP43-203ENST00000570827 CARMIL3Q8ND23 1372 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 TRIM66O15016 1216 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 CDKL5O76039 1030 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 IGKV5-2P06315 115 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 TDO2P48775 406 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 DHX8Q14562 1220 aaKnown RBP11.38□□□□□ -0.59
USP43-203ENST00000570827 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
USP43-203ENST00000570827 GUCA1BQ9UMX6 200 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 N4BP3O15049 544 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 ZBTB43O43298 467 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 RAD51AP2Q09MP3 1159 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 SLC9C2Q5TAH2 1124 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 KRT40Q6A162 431 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
USP43-203ENST00000570827 EEF2KMTQ96G04 330 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 ZNF446Q9NWS9 450 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 KNDC1Q76NI1 1749 aa11.38□□□□□ -0.59
USP43-203ENST00000570827 WDR24Q96S15 920 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
USP43-203ENST00000570827 FOXN1O15353 648 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 ARHGAP6O43182 974 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 IFNL2Q8IZJ0 200 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 FBXO18Q8NFZ0 1043 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP43-203ENST00000570827 CENPHQ9H3R5 247 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 RAD21O60216 631 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 SSRP1Q08945 709 aaKnown RBP11.37□□□□□ -0.59
USP43-203ENST00000570827 KIAA1328Q86T90 577 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 RUFY1Q96T51 708 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 METTL22Q9BUU2 404 aaPredicted RBP11.37□□□□□ -0.59
USP43-203ENST00000570827 NAPBQ9H115 298 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 VPS16Q9H269 839 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 NRXN3Q9Y4C0 1643 aa11.37□□□□□ -0.59
USP43-203ENST00000570827 CTDNEP1O95476 244 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 MTF1Q14872 753 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 IGSF22Q8N9C0 903 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
USP43-203ENST00000570827 CRACR2AQ9BSW2 395 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 RTEL1Q9NZ71 1219 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 KDRP35968 1356 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 EFCAB8A8MWE9 144 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 FGAP02671 866 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 SNRPA1P09661 255 aaKnown RBP11.36□□□□□ -0.59
USP43-203ENST00000570827 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 PTPN12Q05209 780 aaKnown RBP11.36□□□□□ -0.59
USP43-203ENST00000570827 LONRF2Q1L5Z9 754 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 BRAPQ7Z569 592 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
USP43-203ENST00000570827 SMARCC1Q92922 1105 aaPredicted RBP11.36□□□□□ -0.59
USP43-203ENST00000570827 SERTAD1Q9UHV2 236 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 ZMYND10O75800 440 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 CTAGE8P0CG41 777 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 CASP1P29466 404 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 GTF2A1P52655 376 aaPredicted RBP11.36□□□□□ -0.59
USP43-203ENST00000570827 CTAGE6Q86UF2 777 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 CTAGE4Q8IX94 777 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 INCENPQ9NQS7 918 aa11.36□□□□□ -0.59
USP43-203ENST00000570827 SOWAHDA6NJG2 315 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 PIP4K2BP78356 416 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 SART3Q15020 963 aaKnown RBP11.35□□□□□ -0.59
USP43-203ENST00000570827 LDHAL6AQ6ZMR3 332 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 HAUS7Q99871 368 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 TSPYL1Q9H0U9 437 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 SAMSN1Q9NSI8 373 aaKnown RBP11.35□□□□□ -0.59
USP43-203ENST00000570827 CWC25Q9NXE8 425 aaPredicted RBP11.35□□□□□ -0.59
USP43-203ENST00000570827 CTAGE9A4FU28 777 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 M0R2C6 588 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 ZAP70P43403 619 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 RGS22Q8NE09 1264 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 OSBP2Q969R2 916 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 CABP5Q9NP86 173 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 MAST3O60307 1309 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 GOLGA6L9A6NEM1 432 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 BTBD18B2RXH4 712 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 AKR1B15C9JRZ8 316 aaPredicted RBP11.35□□□□□ -0.59
USP43-203ENST00000570827 GPAA1O43292 621 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 YEATS4O95619 227 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 EIF5P55010 431 aaKnown RBP11.35□□□□□ -0.59
USP43-203ENST00000570827 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 KAZALD1Q96I82 304 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 MPHOSPH8Q99549 860 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 FAM107BQ9H098 131 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 SUGCTQ9HAC7 445 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 FHOD1Q9Y613 1164 aa11.35□□□□□ -0.59
USP43-203ENST00000570827 KIF28PB7ZC32 967 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 PATL2C9JE40 543 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 HOXB7P09629 217 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 ADORA1P30542 326 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 ENOX2Q16206 610 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 SPECC1LQ69YQ0 1117 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms