RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RUFY2Q8WXA3 655 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 RAI14Q9P0K7 980 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 JAG2Q9Y219 1238 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 NDUFB9Q9Y6M9 179 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 TAF1P21675 1872 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 MAST3O60307 1309 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 IRS2Q9Y4H2 1338 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 BRCA1P38398 1863 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 USP17L3A6NCW0 530 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 USP17L4A6NCW7 530 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 LDHBP07195 334 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 ZFYP08048 801 aaPredicted RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 HOXB1P14653 301 aaPredicted RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 YBX3P16989 372 aaKnown RBP eCLIP7.94□□□□□ -1.147e-9■■□□□ 12.1
CTDNEP1-204ENST00000570484 LMNB1P20700 586 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 EIF6P56537 245 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 GTF2IP78347 998 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 GSTO1P78417 241 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 ARSIQ5FYB1 569 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 USP17L1Q7RTZ2 530 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 EDC3Q96F86 508 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 UPF2Q9HAU5 1272 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 MYO3BQ8WXR4 1341 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 RAD50Q92878 1312 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 SALL1Q9NSC2 1324 aa7.94□□□□□ -1.14
CTDNEP1-204ENST00000570484 MAST2Q6P0Q8 1798 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 TULP1O00294 542 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 IGSF3O75054 1194 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 CYP2E1P05181 493 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 MFAP1P55081 439 aaKnown RBP7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 STRIP1Q5VSL9 837 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 TTLL5Q6EMB2 1281 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 NAA16Q6N069 864 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 TMED8Q6PL24 325 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 ANTXR1Q9H6X2 564 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 PIH1D3Q9NQM4 214 aaKnown RBP7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 RNF181Q9P0P0 153 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 ZNRF3Q9ULT6 936 aa7.93□□□□□ -1.14
CTDNEP1-204ENST00000570484 ARFGEF1Q9Y6D6 1849 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 RNF113AO15541 343 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 RAD17O75943 681 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 PDE6AP16499 860 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 PRDX5P30044 214 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 TNIP1Q15025 636 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 SLC9C2Q5TAH2 1124 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 CIAPIN1Q6FI81 312 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 CWC27Q6UX04 472 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 TBC1D9Q6ZT07 1266 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 KIAA1211Q6ZU35 1233 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 TICAM2Q86XR7 235 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 MAGEB6Q8N7X4 407 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 AIDAQ96BJ3 306 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 HDAC9Q9UKV0 1011 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 SUGT1Q9Y2Z0 365 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 FAM205AQ6ZU69 1335 aa7.92□□□□□ -1.14
CTDNEP1-204ENST00000570484 F8W031 263 aaPredicted RBP7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 REC8O95072 547 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 LDHCP07864 332 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 CYP7A1P22680 504 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 CHMLP26374 656 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 RBM5P52756 815 aaKnown RBP eCLIP7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 FOSBP53539 338 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 FKBP1AP62942 108 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 NMIQ13287 307 aaPredicted RBP7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 UBE3CQ15386 1083 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 CERS3Q8IU89 383 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 OGFOD1Q8N543 542 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 APPBP2Q92624 585 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 KHSRPQ92945 711 aaKnown RBP eCLIP7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 EPAS1Q99814 870 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 PCDH10Q9P2E7 1040 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 TTF2Q9UNY4 1162 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 PCDHGA10Q9Y5H3 936 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 GJA3Q9Y6H8 435 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 ZNF532Q9HCE3 1301 aa7.91□□□□□ -1.14
CTDNEP1-204ENST00000570484 COL4A5P29400 1685 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 MROH7-TTC4A0A0A0MT08 1334 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 CCDC171Q6TFL3 1326 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 A0A0D9SFI3 127 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 POTEMA6NI47 508 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 YDJCA8MPS7 323 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 PSMD14O00487 310 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 BAG3O95817 575 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 NUDT7P0C024 238 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 MCCP23508 829 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 RPS12P25398 132 aaKnown RBP7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 ADD2P35612 726 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 MECOMQ03112 1051 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 DACT2Q5SW24 774 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 RBM26Q5T8P6 1007 aaKnown RBP7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 C9orf131Q5VYM1 1079 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 RSBN1LQ6PCB5 846 aaPredicted RBP7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 KIAA0825Q8IV33 1275 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 ZNF710Q8N1W2 664 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 TEKT1Q969V4 418 aa7.9□□□□□ -1.14
CTDNEP1-204ENST00000570484 FAM163AQ96GL9 167 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms