RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 MRC1P22897 1456 aa13.49□□□□□ -0.25
PDXDC1-217ENST00000570001 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 ADD1P35611 737 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 USP28Q96RU2 1077 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 BARGINQ6ZT62 677 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 GSTO1P78417 241 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 CARMIL3Q8ND23 1372 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 RTL9Q8NET4 1388 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 SDR42E1Q8WUS8 393 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 ZKSCAN5Q9Y2L8 839 aa13.48□□□□□ -0.25
PDXDC1-217ENST00000570001 FAM160A1Q05DH4 1040 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 STRBPQ96SI9 672 aaKnown RBP13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 BIN1O00499 593 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 ARID4AP29374 1257 aaPredicted RBP13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 PPARAQ07869 468 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 MCM9Q9NXL9 1143 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 ZMYM6O95789 1325 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 PRDM1O75626 825 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 A0A1B0GVL5 298 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 MARCH6O60337 910 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 SYKP43405 635 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 RESTQ13127 1097 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 SCN11AQ9UI33 1791 aa13.47□□□□□ -0.25
PDXDC1-217ENST00000570001 NR1I2O75469 434 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 PRKAB2O43741 272 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 KRT40Q6A162 431 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 FILIP1Q7Z7B0 1213 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 LCORLQ8N3X6 602 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 CNNM3Q8NE01 707 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
PDXDC1-217ENST00000570001 GLIPR1L2Q4G1C9 344 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 ANO1Q5XXA6 986 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 SLF2Q8IX21 1173 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 SMTNL1A8MU46 457 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 RPS6KA4O75676 772 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 KIF5BP33176 963 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 APOA5Q6Q788 366 aa13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.26
PDXDC1-217ENST00000570001 ZNF830Q96NB3 372 aaPredicted RBP13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 MYSM1Q5VVJ2 828 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 ZNF592Q92610 1267 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 SERPINC1P01008 464 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 CALM1P0DP23 149 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 CALM2P0DP24 149 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 CALM3P0DP25 149 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 TXLNAP40222 546 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 NLRP5P59047 1200 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 NARFQ9UHQ1 456 aa13.45□□□□□ -0.26
PDXDC1-217ENST00000570001 NTSR2O95665 410 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 TBC1D9BQ66K14 1250 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 SMARCC2Q8TAQ2 1214 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 SH2B2O14492 632 aaPredicted RBP13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 VPS72Q15906 364 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 DEXIO95424 95 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 FAM196AQ6ZSG2 479 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 DACH1Q9UI36 760 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 STX8Q9UNK0 236 aa13.44□□□□□ -0.26
PDXDC1-217ENST00000570001 FTOQ9C0B1 505 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 UFL1O94874 794 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 YEATS4O95619 227 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 ISM2Q6H9L7 571 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 SMIM5Q71RC9 77 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 ZNF804BA4D1E1 1349 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 USP17L12C9JPN9 530 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 USP17L21D6R901 530 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 TSPY3P0CV98 308 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 TSPY8P0CW00 308 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 ZNF654Q8IZM8 581 aa13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 CELF1Q92879 486 aaKnown RBP13.43□□□□□ -0.26
PDXDC1-217ENST00000570001 TPM2P07951 284 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 PDILTQ8N807 584 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 JCADQ9P266 1359 aa13.42□□□□□ -0.26
PDXDC1-217ENST00000570001 PES1O00541 588 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms