RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RPAP1Q9BWH6 1393 aaPredicted RBP28.21■■■□□ 2.11
RAB40C-212ENST00000569575 WNT10BO00744 389 aa28.2■■■□□ 2.1
RAB40C-212ENST00000569575 BTDP43251 543 aa28.2■■■□□ 2.1
RAB40C-212ENST00000569575 TMOD2Q9NZR1 351 aa28.2■■■□□ 2.1
RAB40C-212ENST00000569575 PRMT6Q96LA8 375 aaPredicted RBP28.19■■■□□ 2.1
RAB40C-212ENST00000569575 RIOK1Q9BRS2 568 aaKnown RBP28.19■■■□□ 2.1
RAB40C-212ENST00000569575 TAF1DQ9H5J8 278 aaPredicted RBP28.19■■■□□ 2.1
RAB40C-212ENST00000569575 UTRNP46939 3433 aa28.18■■■□□ 2.1
RAB40C-212ENST00000569575 NMIQ13287 307 aaPredicted RBP28.18■■■□□ 2.1
RAB40C-212ENST00000569575 ADGRA1Q86SQ6 560 aa28.18■■■□□ 2.1
RAB40C-212ENST00000569575 OSBP2Q969R2 916 aa28.18■■■□□ 2.1
RAB40C-212ENST00000569575 POTECB2RU33 542 aa28.17■■■□□ 2.1
RAB40C-212ENST00000569575 TNFAIP1Q13829 316 aa28.17■■■□□ 2.1
RAB40C-212ENST00000569575 CWC27Q6UX04 472 aaKnown RBP28.17■■■□□ 2.1
RAB40C-212ENST00000569575 SAMD7Q7Z3H4 446 aa28.17■■■□□ 2.1
RAB40C-212ENST00000569575 CRNKL1Q9BZJ0 848 aaKnown RBP28.17■■■□□ 2.1
RAB40C-212ENST00000569575 PUS7LQ9H0K6 701 aaKnown RBP28.17■■■□□ 2.1
RAB40C-212ENST00000569575 AATFQ9NY61 560 aaKnown RBP eCLIP28.17■■■□□ 2.1
RAB40C-212ENST00000569575 ECM29Q5VYK3 1845 aa28.17■■■□□ 2.1
RAB40C-212ENST00000569575 PITPNM2Q9BZ72 1349 aa28.17■■■□□ 2.1
RAB40C-212ENST00000569575 SPDYE2Q495Y8 402 aa28.16■■■□□ 2.1
RAB40C-212ENST00000569575 IDI2Q9BXS1 227 aa28.16■■■□□ 2.1
RAB40C-212ENST00000569575 USP40Q9NVE5 1235 aa28.16■■■□□ 2.1
RAB40C-212ENST00000569575 PGAP2Q9UHJ9 254 aa28.16■■■□□ 2.1
RAB40C-212ENST00000569575 RHBDL3P58872 404 aa28.15■■■□□ 2.1
RAB40C-212ENST00000569575 TBC1D10BQ4KMP7 808 aaPredicted RBP28.15■■■□□ 2.1
RAB40C-212ENST00000569575 CDC42EP5Q6NZY7 148 aa28.15■■■□□ 2.1
RAB40C-212ENST00000569575 GIMAP6Q6P9H5 292 aa28.15■■■□□ 2.1
RAB40C-212ENST00000569575 STRBPQ96SI9 672 aaKnown RBP28.15■■■□□ 2.1
RAB40C-212ENST00000569575 GPAA1O43292 621 aa28.14■■■□□ 2.1
RAB40C-212ENST00000569575 RBM26Q5T8P6 1007 aaKnown RBP28.14■■■□□ 2.1
RAB40C-212ENST00000569575 MIGA1Q8NAN2 632 aa28.14■■■□□ 2.1
RAB40C-212ENST00000569575 DDRGK1Q96HY6 314 aa28.14■■■□□ 2.1
RAB40C-212ENST00000569575 FAM227BQ96M60 508 aa28.14■■■□□ 2.1
RAB40C-212ENST00000569575 RRAGCQ9HB90 399 aa28.14■■■□□ 2.1
RAB40C-212ENST00000569575 ATP8A2Q9NTI2 1148 aa28.14■■■□□ 2.1
RAB40C-212ENST00000569575 A0A0D9SFI3 127 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 SHTN1A0MZ66 631 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 SGSM2O43147 1006 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 EPB41L2O43491 1005 aaKnown RBP28.13■■■□□ 2.09
RAB40C-212ENST00000569575 MBD4O95243 580 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 TNNI2P48788 182 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 FAM83AQ86UY5 434 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 APOBEC3FQ8IUX4 373 aaKnown RBP28.13■■■□□ 2.09
RAB40C-212ENST00000569575 GPBP1L1Q9HC44 474 aaPredicted RBP28.13■■■□□ 2.09
RAB40C-212ENST00000569575 ZNF70Q9UC06 446 aaPredicted RBP28.13■■■□□ 2.09
RAB40C-212ENST00000569575 CCDC171Q6TFL3 1326 aa28.13■■■□□ 2.09
RAB40C-212ENST00000569575 ENTPD3O75355 529 aa28.12■■■□□ 2.09
RAB40C-212ENST00000569575 NBPF9Q3BBW0 867 aa28.12■■■□□ 2.09
RAB40C-212ENST00000569575 TRPM4Q8TD43 1214 aa28.12■■■□□ 2.09
RAB40C-212ENST00000569575 ESYT1Q9BSJ8 1104 aa28.12■■■□□ 2.09
RAB40C-212ENST00000569575 TDRD3Q9H7E2 651 aaKnown RBP28.12■■■□□ 2.09
RAB40C-212ENST00000569575 TAOK2Q9UL54 1235 aa28.12■■■□□ 2.09
RAB40C-212ENST00000569575 PATL2C9JE40 543 aaKnown RBP28.11■■■□□ 2.09
RAB40C-212ENST00000569575 TEX11Q8IYF3 940 aa28.11■■■□□ 2.09
RAB40C-212ENST00000569575 NACAP1Q9BZK3 213 aa28.11■■■□□ 2.09
RAB40C-212ENST00000569575 PPP2R3BQ9Y5P8 575 aa28.11■■■□□ 2.09
RAB40C-212ENST00000569575 M0R2C6 588 aa28.1■■■□□ 2.09
RAB40C-212ENST00000569575 HIRAP54198 1017 aaPredicted RBP28.1■■■□□ 2.09
RAB40C-212ENST00000569575 KIAA1211Q6ZU35 1233 aa28.1■■■□□ 2.09
RAB40C-212ENST00000569575 LCORLQ8N3X6 602 aa28.1■■■□□ 2.09
RAB40C-212ENST00000569575 DCPSQ96C86 337 aaKnown RBP28.1■■■□□ 2.09
RAB40C-212ENST00000569575 ARMT1Q9H993 441 aa28.1■■■□□ 2.09
RAB40C-212ENST00000569575 EGFRP00533 1210 aa28.09■■■□□ 2.09
RAB40C-212ENST00000569575 YY1P25490 414 aa28.09■■■□□ 2.09
RAB40C-212ENST00000569575 DYNLL1P63167 89 aaKnown RBP28.09■■■□□ 2.09
RAB40C-212ENST00000569575 SH3RF3Q8TEJ3 882 aaPredicted RBP28.09■■■□□ 2.09
RAB40C-212ENST00000569575 SEC62Q99442 399 aaKnown RBP28.09■■■□□ 2.09
RAB40C-212ENST00000569575 DSCC1Q9BVC3 393 aa28.09■■■□□ 2.09
RAB40C-212ENST00000569575 SLC4A4Q9Y6R1 1079 aa28.09■■■□□ 2.09
RAB40C-212ENST00000569575 WDHD1O75717 1129 aaPredicted RBP28.08■■■□□ 2.09
RAB40C-212ENST00000569575 REC8O95072 547 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 CHGBP05060 677 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 USP5P45974 858 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 ALX1Q15699 326 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 SLFNL1Q499Z3 407 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 LDHDQ86WU2 507 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 DHX36Q9H2U1 1008 aaKnown RBP28.08■■■□□ 2.09
RAB40C-212ENST00000569575 ZMYM6O95789 1325 aa28.08■■■□□ 2.09
RAB40C-212ENST00000569575 COL2A1P02458 1487 aaPredicted RBP28.08■■■□□ 2.09
RAB40C-212ENST00000569575 NMRK2Q9NPI5 230 aa28.07■■■□□ 2.08
RAB40C-212ENST00000569575 PCDHAC2Q9Y5I4 1007 aa28.07■■■□□ 2.08
RAB40C-212ENST00000569575 ADAMTSL1Q8N6G6 1762 aa28.06■■■□□ 2.08
RAB40C-212ENST00000569575 FOCADQ5VW36 1801 aa28.06■■■□□ 2.08
RAB40C-212ENST00000569575 AMOTL1Q8IY63 956 aa28.06■■■□□ 2.08
RAB40C-212ENST00000569575 FAM151AQ8WW52 585 aa28.06■■■□□ 2.08
RAB40C-212ENST00000569575 EAPPQ56P03 285 aaPredicted RBP28.05■■■□□ 2.08
RAB40C-212ENST00000569575 ANGEL2Q5VTE6 544 aaKnown RBP28.05■■■□□ 2.08
RAB40C-212ENST00000569575 TGFBRAP1Q8WUH2 860 aa28.05■■■□□ 2.08
RAB40C-212ENST00000569575 HOOK2Q96ED9 719 aa28.05■■■□□ 2.08
RAB40C-212ENST00000569575 MKRN1Q9UHC7 482 aaKnown RBP28.05■■■□□ 2.08
RAB40C-212ENST00000569575 CTNNA3Q9UI47 895 aa28.05■■■□□ 2.08
RAB40C-212ENST00000569575 GSG1L2A8MUP6 293 aa28.04■■■□□ 2.08
RAB40C-212ENST00000569575 HSPD1P10809 573 aaKnown RBP28.04■■■□□ 2.08
RAB40C-212ENST00000569575 CDC37L1Q7L3B6 337 aa28.04■■■□□ 2.08
RAB40C-212ENST00000569575 ZNF589Q86UQ0 364 aaPredicted RBP28.04■■■□□ 2.08
RAB40C-212ENST00000569575 SULF1Q8IWU6 871 aa28.04■■■□□ 2.08
RAB40C-212ENST00000569575 VEZTQ9HBM0 779 aa28.04■■■□□ 2.08
RAB40C-212ENST00000569575 DCP1AQ9NPI6 582 aaPredicted RBP28.04■■■□□ 2.08
RAB40C-212ENST00000569575 GGA3Q9NZ52 723 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms