RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 BTDP43251 543 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 PPP4CP60510 307 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
HERPUD1-216ENST00000568814 EPS15P42566 896 aa12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 MCMDC2Q4G0Z9 681 aa12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 USP50Q70EL3 339 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
HERPUD1-216ENST00000568814 A0A0D9SFI3 127 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 MBD4O95243 580 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 GNAT2P19087 354 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 EPHX2P34913 555 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 CWC27Q6UX04 472 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 KLRG1Q96E93 195 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 RIOK1Q9BRS2 568 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 PUS7LQ9H0K6 701 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 AATFQ9NY61 560 aaKnown RBP eCLIP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-216ENST00000568814 SHTN1A0MZ66 631 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 WNT10BO00744 389 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 GPAA1O43292 621 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 FKBP1CQ5VVH2 108 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 PRMT6Q96LA8 375 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
HERPUD1-216ENST00000568814 M0R2C6 588 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 SGSM2O43147 1006 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 CHGBP05060 677 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 RHBDL3P58872 404 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 TNFAIP1Q13829 316 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 SLFNL1Q499Z3 407 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 CDC42EP5Q6NZY7 148 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 LCORLQ8N3X6 602 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 JMYQ8N9B5 988 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 TRPM4Q8TD43 1214 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 STRBPQ96SI9 672 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 SEC62Q99442 399 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 PITPNM2Q9BZ72 1349 aa12.25□□□□□ -0.45
HERPUD1-216ENST00000568814 POTECB2RU33 542 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 EGFRP00533 1210 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 TNNI2P48788 182 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 DYNLL1P63167 89 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 KIAA1211Q6ZU35 1233 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 APOBEC3FQ8IUX4 373 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 NACAP1Q9BZK3 213 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 TDRD3Q9H7E2 651 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 ZNF70Q9UC06 446 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
HERPUD1-216ENST00000568814 FOCADQ5VW36 1801 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 COL2A1P02458 1487 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 ENTPD3O75355 529 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 TOMM70O94826 608 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 REC8O95072 547 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 USP5P45974 858 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 GIMAP6Q6P9H5 292 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 PCDHAC2Q9Y5I4 1007 aa12.23□□□□□ -0.45
HERPUD1-216ENST00000568814 ZMYM6O95789 1325 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 PATL2C9JE40 543 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 AMOTL1Q8IY63 956 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 VEZTQ9HBM0 779 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms