RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 RAB44Q7Z6P3 723 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 NBPF4Q96M43 638 aa9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 DACH1Q9UI36 760 aa9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 SUPT16HQ9Y5B9 1047 aaKnown RBP9.46□□□□□ -0.9
HERPUD1-214ENST00000568651 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 ZBTB42B2RXF5 422 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 ENC1O14682 589 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 GREM1O60565 184 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 GHRHP01286 108 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 AGMOQ6ZNB7 445 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 ZNF296Q8WUU4 475 aaPredicted RBP9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 NANOS1Q8WY41 292 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 TNFRSF25Q93038 417 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 PRR12Q9ULL5 1215 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 PREX2Q70Z35 1606 aa9.45□□□□□ -0.9
HERPUD1-214ENST00000568651 KIF3BO15066 747 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 SMNDC1O75940 238 aaKnown RBP eCLIP9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 CELA3AP09093 270 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 GARTP22102 1010 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 SOX9P48436 509 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 SPRED3Q2MJR0 410 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 RASSF4Q9H2L5 321 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 DNAJB12Q9NXW2 375 aaKnown RBP9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 ZNF644Q9H582 1327 aaPredicted RBP9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 NPHP4O75161 1426 aaPredicted RBP9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 MROH2AA6NES4 1674 aa9.44□□□□□ -0.9
HERPUD1-214ENST00000568651 ZNF142P52746 1687 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 DNMT1P26358 1616 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 NEURL4Q96JN8 1562 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 ATP7AQ04656 1500 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 GPATCH8Q9UKJ3 1502 aaKnown RBP9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 FBXO24O75426 580 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 CTBSQ01459 385 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 SYT9Q86SS6 491 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 THEMISQ8N1K5 641 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 BSNDQ8WZ55 320 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 HHIPQ96QV1 700 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 CLEC4MQ9H2X3 399 aaPredicted RBP9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 TMEM39AQ9NV64 488 aa9.43□□□□□ -0.9
HERPUD1-214ENST00000568651 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 TTBK2Q6IQ55 1244 aa9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 FBXL19Q6PCT2 694 aa9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 LRRC3Q9BY71 257 aa9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
HERPUD1-214ENST00000568651 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 WASHC2CQ9Y4E1 1318 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 METTL12A8MUP2 240 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 PPFIA3O75145 1194 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 TRPA1O75762 1119 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 ATP11AP98196 1134 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 NFX1Q12986 1120 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 CAMK2GQ13555 558 aaPredicted RBP9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 TRIM42Q8IWZ5 723 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 CACTIN-AS1Q8N1I8 211 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 ASAP3Q8TDY4 903 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 POP1Q99575 1024 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 ADAM19Q9H013 955 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 PLXNC1O60486 1568 aa9.41□□□□□ -0.9
HERPUD1-214ENST00000568651 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 J3QW42 95 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 SMARCA5O60264 1052 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 B3GALT4O96024 378 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 PF4P02776 101 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 ARAFP10398 606 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 BMP4P12644 408 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 EIF2AK2P19525 551 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 FAAP100Q0VG06 881 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 FAM196AQ6ZSG2 479 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 GPN3Q9UHW5 284 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 SOX13Q9UN79 622 aa9.4□□□□□ -0.9
HERPUD1-214ENST00000568651 LRRC7Q96NW7 1537 aa9.4□□□□□ -0.91
HERPUD1-214ENST00000568651 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.91
HERPUD1-214ENST00000568651 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 LRRIQ1Q96JM4 1722 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 SSBP05455 408 aaKnown RBP eCLIP9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 PTPRAP18433 802 aa9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-214ENST00000568651 NASPP49321 788 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms