RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TCP10L2B9ZVM9 353 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-211ENST00000568291 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 ZBTB48P10074 688 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-211ENST00000568291 PRDX5P30044 214 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 RASGRF1Q13972 1273 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 SNRKQ9NRH2 765 aa11.74□□□□□ -0.53
SF3B3-211ENST00000568291 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-211ENST00000568291 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
SF3B3-211ENST00000568291 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
SF3B3-211ENST00000568291 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
SF3B3-211ENST00000568291 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
SF3B3-211ENST00000568291 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
SF3B3-211ENST00000568291 CCDC8Q9H0W5 538 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-211ENST00000568291 ZBTB40Q9NUA8 1239 aa11.73□□□□□ -0.53
SF3B3-211ENST00000568291 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
SF3B3-211ENST00000568291 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
SF3B3-211ENST00000568291 AKAP2Q9Y2D5 859 aa11.73□□□□□ -0.53
SF3B3-211ENST00000568291 IGF2BP3O00425 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
SF3B3-211ENST00000568291 MS4A1P11836 297 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 IREB2P48200 963 aaKnown RBP11.72□□□□□ -0.53
SF3B3-211ENST00000568291 RASA3Q14644 834 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 SUPT20HL1Q3ZLR7 823 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
SF3B3-211ENST00000568291 WDR66Q8TBY9 1149 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 TBC1D22AQ8WUA7 517 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 ABCF2Q9UG63 623 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 SERPINA10Q9UK55 444 aa11.72□□□□□ -0.53
SF3B3-211ENST00000568291 GJA5P36382 358 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 INHBEP58166 350 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 TNFAIP1Q13829 316 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 TNNI3KQ59H18 835 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
SF3B3-211ENST00000568291 TEKT1Q969V4 418 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-211ENST00000568291 TMEM39BQ9GZU3 492 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 IL1RAPL2Q9NP60 686 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 HMG20BQ9P0W2 317 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 DENND2AQ9ULE3 1009 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 DDX19BQ9UMR2 479 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
SF3B3-211ENST00000568291 TRIM17Q9Y577 477 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 FPGT-TNNI3KV9GXZ4 949 aa11.71□□□□□ -0.53
SF3B3-211ENST00000568291 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
SF3B3-211ENST00000568291 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
SF3B3-211ENST00000568291 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
SF3B3-211ENST00000568291 LDHBP07195 334 aaKnown RBP11.7□□□□□ -0.54
SF3B3-211ENST00000568291 OTOP1Q7RTM1 612 aa11.7□□□□□ -0.54
SF3B3-211ENST00000568291 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
SF3B3-211ENST00000568291 USP2O75604 605 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-211ENST00000568291 MCAMP43121 646 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 TCP10Q12799 353 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 CRHR2Q13324 411 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 PDE3AQ14432 1141 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 TTC39AQ5SRH9 613 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-211ENST00000568291 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 ERO1AQ96HE7 468 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 DBNLQ9UJU6 430 aaKnown RBP11.69□□□□□ -0.54
SF3B3-211ENST00000568291 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
SF3B3-211ENST00000568291 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 MECOMQ03112 1051 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 NFIAQ12857 509 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 CDC42EP5Q6NZY7 148 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 AACSQ86V21 672 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 ZNF384Q8TF68 577 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 OPTNQ96CV9 577 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 ZDHHC15Q96MV8 337 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
SF3B3-211ENST00000568291 DOCK2Q92608 1830 aa11.67□□□□□ -0.54
SF3B3-211ENST00000568291 SEMA3EO15041 775 aa11.67□□□□□ -0.54
SF3B3-211ENST00000568291 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-211ENST00000568291 RRP1P56182 461 aaKnown RBP11.67□□□□□ -0.54
SF3B3-211ENST00000568291 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
SF3B3-211ENST00000568291 HHIPL2Q6UWX4 724 aa11.67□□□□□ -0.54
SF3B3-211ENST00000568291 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
SF3B3-211ENST00000568291 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
SF3B3-211ENST00000568291 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
SF3B3-211ENST00000568291 TEPSINQ96N21 525 aa11.67□□□□□ -0.54
SF3B3-211ENST00000568291 RAI14Q9P0K7 980 aa11.67□□□□□ -0.54
SF3B3-211ENST00000568291 HTTP42858 3142 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-211ENST00000568291 ZAP70P43403 619 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 TNNI2P48788 182 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 VGLL4Q14135 290 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 CCDC158Q5M9N0 1113 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 CRBNQ96SW2 442 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 PTPN18Q99952 460 aa11.66□□□□□ -0.54
SF3B3-211ENST00000568291 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms