RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 ITPRIPQ8IWB1 547 aa15.93■□□□□ 0.14
TSC2-220ENST00000568238 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
TSC2-220ENST00000568238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.93■□□□□ 0.14
TSC2-220ENST00000568238 HOOK2Q96ED9 719 aa15.93■□□□□ 0.14
TSC2-220ENST00000568238 DAGLAQ9Y4D2 1042 aa15.93■□□□□ 0.14
TSC2-220ENST00000568238 PDS5AQ29RF7 1337 aaKnown RBP15.93■□□□□ 0.14
TSC2-220ENST00000568238 A0A1B0GUL7 405 aa15.92■□□□□ 0.14
TSC2-220ENST00000568238 IGF2BP3O00425 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
TSC2-220ENST00000568238 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
TSC2-220ENST00000568238 TIMM10P62072 90 aa15.92■□□□□ 0.14
TSC2-220ENST00000568238 TFCP2Q12800 502 aa15.92■□□□□ 0.14
TSC2-220ENST00000568238 RASGRF1Q13972 1273 aa15.92■□□□□ 0.14
TSC2-220ENST00000568238 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
TSC2-220ENST00000568238 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
TSC2-220ENST00000568238 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.92■□□□□ 0.14
TSC2-220ENST00000568238 FKTNO75072 461 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 MS4A1P11836 297 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 MAP3K9P80192 1104 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 DCAF15Q66K64 600 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 XAGE2Q96GT9 111 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 WRNIP1Q96S55 665 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 R3HDMLQ9H3Y0 253 aa15.91■□□□□ 0.14
TSC2-220ENST00000568238 PNMA6EA0A0J9YXQ4 647 aa15.9■□□□□ 0.14
TSC2-220ENST00000568238 PKN2Q16513 984 aaKnown RBP15.9■□□□□ 0.14
TSC2-220ENST00000568238 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
TSC2-220ENST00000568238 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
TSC2-220ENST00000568238 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
TSC2-220ENST00000568238 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
TSC2-220ENST00000568238 TESPA1A2RU30 521 aaPredicted RBP15.89■□□□□ 0.13
TSC2-220ENST00000568238 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
TSC2-220ENST00000568238 FAM151AQ8WW52 585 aa15.89■□□□□ 0.13
TSC2-220ENST00000568238 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
TSC2-220ENST00000568238 NEUROD6Q96NK8 337 aa15.89■□□□□ 0.13
TSC2-220ENST00000568238 ABCF2Q9UG63 623 aa15.89■□□□□ 0.13
TSC2-220ENST00000568238 SNCAIPQ9Y6H5 919 aa15.89■□□□□ 0.13
TSC2-220ENST00000568238 SPDYE5A6NIY4 337 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 RGS19P49795 217 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 GTF2A2P52657 109 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 TCP10Q12799 353 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 NFIAQ12857 509 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 CRHR2Q13324 411 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 SPTY2D1Q68D10 685 aaPredicted RBP15.88■□□□□ 0.13
TSC2-220ENST00000568238 MS4A4AQ96JQ5 239 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 PTPN18Q99952 460 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 ZNF341Q9BYN7 854 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 USP40Q9NVE5 1235 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 HPS5Q9UPZ3 1129 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 COG6Q9Y2V7 657 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.88■□□□□ 0.13
TSC2-220ENST00000568238 GAKO14976 1311 aa15.88■□□□□ 0.13
TSC2-220ENST00000568238 RFX7Q2KHR2 1363 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 CCL15-CCL14A0A0B4J2E2 113 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 MLLT1Q03111 559 aaPredicted RBP15.87■□□□□ 0.13
TSC2-220ENST00000568238 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 CCL15Q16663 113 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 ERO1BQ86YB8 467 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 SLF2Q8IX21 1173 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 BRI3BPQ8WY22 251 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 ZKSCAN4Q969J2 545 aaPredicted RBP15.87■□□□□ 0.13
TSC2-220ENST00000568238 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
TSC2-220ENST00000568238 BRCA2P51587 3418 aa15.87■□□□□ 0.13
TSC2-220ENST00000568238 POLA2Q14181 598 aa15.86■□□□□ 0.13
TSC2-220ENST00000568238 FBXO46Q6PJ61 603 aaPredicted RBP15.86■□□□□ 0.13
TSC2-220ENST00000568238 MIGA2Q7L4E1 593 aa15.86■□□□□ 0.13
TSC2-220ENST00000568238 C1orf115Q9H7X2 142 aa15.86■□□□□ 0.13
TSC2-220ENST00000568238 FAM198AQ9UFP1 575 aa15.86■□□□□ 0.13
TSC2-220ENST00000568238 ARID4AP29374 1257 aaPredicted RBP15.85■□□□□ 0.13
TSC2-220ENST00000568238 SOX10P56693 466 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 PPIL2Q13356 520 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 OS9Q13438 667 aaPredicted RBP15.85■□□□□ 0.13
TSC2-220ENST00000568238 ERICH6Q7L0X2 663 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 SPATA5Q8NB90 893 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 HMG20BQ9P0W2 317 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 MROH7-TTC4A0A0A0MT08 1334 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 PDE4DIPQ5VU43 2346 aa15.85■□□□□ 0.13
TSC2-220ENST00000568238 DOCK1Q14185 1865 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 INPP5BP32019 993 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 BTDP43251 543 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 RGS3P49796 1198 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 SNAPC2Q13487 334 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 TAF1CQ15572 869 aaPredicted RBP15.84■□□□□ 0.13
TSC2-220ENST00000568238 PI16Q6UXB8 463 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 SSH3Q8TE77 659 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 FAM163AQ96GL9 167 aaPredicted RBP15.84■□□□□ 0.13
TSC2-220ENST00000568238 ERO1AQ96HE7 468 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 IDI2Q9BXS1 227 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 ATRNL1Q5VV63 1379 aa15.84■□□□□ 0.13
TSC2-220ENST00000568238 MYO5AQ9Y4I1 1855 aaKnown RBP15.83■□□□□ 0.12
TSC2-220ENST00000568238 IRF6O14896 467 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
TSC2-220ENST00000568238 ENTPD3O75355 529 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 UQCRFS1P1P0C7P4 283 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 CETPP11597 493 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 ATP8B2P98198 1209 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 MECOMQ03112 1051 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 PPATQ06203 517 aa15.83■□□□□ 0.12
TSC2-220ENST00000568238 OTOP1Q7RTM1 612 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms