RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 GPR153Q6NV75 609 aa15.06■□□□□ 0
CLK3-222ENST00000568232 G2E3Q7L622 706 aa15.06■□□□□ 0
CLK3-222ENST00000568232 ANKRD23Q86SG2 305 aa15.06■□□□□ 0
CLK3-222ENST00000568232 PAWRQ96IZ0 340 aaKnown RBP15.06■□□□□ 0
CLK3-222ENST00000568232 DEFB118Q96PH6 123 aa15.06■□□□□ 0
CLK3-222ENST00000568232 FAM205AQ6ZU69 1335 aa15.06■□□□□ 0
CLK3-222ENST00000568232 SPTBN5Q9NRC6 3674 aaKnown RBP15.05■□□□□ 0
CLK3-222ENST00000568232 ELNP15502 786 aa15.05■□□□□ -0
CLK3-222ENST00000568232 BMP8BP34820 402 aa15.05■□□□□ -0
CLK3-222ENST00000568232 BCAMP50895 628 aa15.05■□□□□ -0
CLK3-222ENST00000568232 SLAIN1Q8ND83 568 aa15.05■□□□□ -0
CLK3-222ENST00000568232 TDRD7Q8NHU6 1098 aaKnown RBP15.05■□□□□ -0
CLK3-222ENST00000568232 DIS3LQ8TF46 1054 aaKnown RBP15.05■□□□□ -0
CLK3-222ENST00000568232 IFT57Q9NWB7 429 aa15.05■□□□□ -0
CLK3-222ENST00000568232 ZMYND8Q9ULU4 1186 aaPredicted RBP15.05■□□□□ -0
CLK3-222ENST00000568232 ADAMTS8Q9UP79 889 aa15.05■□□□□ -0
CLK3-222ENST00000568232 ARAP2Q8WZ64 1704 aa15.04■□□□□ -0
CLK3-222ENST00000568232 HAX1O00165 279 aa15.04■□□□□ -0
CLK3-222ENST00000568232 ADCY3O60266 1144 aa15.04■□□□□ -0
CLK3-222ENST00000568232 CYP2C8P10632 490 aa15.04■□□□□ -0
CLK3-222ENST00000568232 INPP5BP32019 993 aa15.04■□□□□ -0
CLK3-222ENST00000568232 GYG1P46976 350 aa15.04■□□□□ -0
CLK3-222ENST00000568232 FCGRTP55899 365 aa15.04■□□□□ -0
CLK3-222ENST00000568232 GNAI1P63096 354 aa15.04■□□□□ -0
CLK3-222ENST00000568232 PPATQ06203 517 aa15.04■□□□□ -0
CLK3-222ENST00000568232 MOGSQ13724 837 aa15.04■□□□□ -0
CLK3-222ENST00000568232 MIGA2Q7L4E1 593 aa15.04■□□□□ -0
CLK3-222ENST00000568232 C7orf61Q8IZ16 206 aa15.04■□□□□ -0
CLK3-222ENST00000568232 ZNF594Q96JF6 807 aaPredicted RBP15.04■□□□□ -0
CLK3-222ENST00000568232 EYSQ5T1H1 3165 aa15.04■□□□□ -0
CLK3-222ENST00000568232 INHAP05111 366 aa15.03■□□□□ -0
CLK3-222ENST00000568232 BCRP11274 1271 aa15.03■□□□□ -0
CLK3-222ENST00000568232 SYN1P17600 705 aa15.03■□□□□ -0
CLK3-222ENST00000568232 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.03■□□□□ -0
CLK3-222ENST00000568232 CHMP3Q9Y3E7 222 aa15.03■□□□□ -0
CLK3-222ENST00000568232 LAMA2P24043 3122 aaKnown RBP15.03■□□□□ -0
CLK3-222ENST00000568232 FLT3LGP49771 235 aa15.02■□□□□ -0
CLK3-222ENST00000568232 FOXO4P98177 505 aa15.02■□□□□ -0
CLK3-222ENST00000568232 IFIT5Q13325 482 aaKnown RBP15.02■□□□□ -0
CLK3-222ENST00000568232 WDR43Q15061 677 aaKnown RBP eCLIP15.02■□□□□ -0
CLK3-222ENST00000568232 HIBADHP31937 336 aaKnown RBP15.01□□□□□ -0.01
CLK3-222ENST00000568232 LRIT3Q3SXY7 679 aa15.01□□□□□ -0.01
CLK3-222ENST00000568232 GPAT2Q6NUI2 795 aa15.01□□□□□ -0.01
CLK3-222ENST00000568232 FAM84BQ96KN1 310 aaPredicted RBP15.01□□□□□ -0.01
CLK3-222ENST00000568232 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
CLK3-222ENST00000568232 PAK6Q9NQU5 681 aaPredicted RBP15.01□□□□□ -0.01
CLK3-222ENST00000568232 IQSEC3Q9UPP2 1182 aaPredicted RBP15.01□□□□□ -0.01
CLK3-222ENST00000568232 KCNH4Q9UQ05 1017 aa15.01□□□□□ -0.01
CLK3-222ENST00000568232 A0A1B0GUL6 1792 aa15.01□□□□□ -0.01
CLK3-222ENST00000568232 MAGEA10P43363 369 aaPredicted RBP15□□□□□ -0.01
CLK3-222ENST00000568232 RALBP1Q15311 655 aa15□□□□□ -0.01
CLK3-222ENST00000568232 LDHAL6AQ6ZMR3 332 aa15□□□□□ -0.01
CLK3-222ENST00000568232 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
CLK3-222ENST00000568232 STK31Q9BXU1 1019 aa15□□□□□ -0.01
CLK3-222ENST00000568232 ZNF341Q9BYN7 854 aa15□□□□□ -0.01
CLK3-222ENST00000568232 APAF1O14727 1248 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
CLK3-222ENST00000568232 FAM83AQ86UY5 434 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 TDHQ8IZJ6 230 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 PARK7Q99497 189 aaKnown RBP14.99□□□□□ -0.01
CLK3-222ENST00000568232 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 CNNM1Q9NRU3 951 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 TAOK2Q9UL54 1235 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 ALPK3Q96L96 1907 aa14.99□□□□□ -0.01
CLK3-222ENST00000568232 EPHA10Q5JZY3 1008 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 DCAF15Q66K64 600 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 APOBEC3HQ6NTF7 200 aaKnown RBP14.98□□□□□ -0.01
CLK3-222ENST00000568232 LMBR1LQ6UX01 489 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 PXYLP1Q8TE99 480 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 TEKT1Q969V4 418 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 CHMP4AQ9BY43 222 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 TMOD2Q9NZR1 351 aa14.98□□□□□ -0.01
CLK3-222ENST00000568232 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
CLK3-222ENST00000568232 HDLBPQ00341 1268 aaKnown RBP14.97□□□□□ -0.01
CLK3-222ENST00000568232 TAF7LQ5H9L4 462 aa14.97□□□□□ -0.01
CLK3-222ENST00000568232 LINS1Q8NG48 757 aa14.97□□□□□ -0.01
CLK3-222ENST00000568232 DNAAF4Q8WXU2 420 aa14.97□□□□□ -0.01
CLK3-222ENST00000568232 TSR2Q969E8 191 aaKnown RBP14.97□□□□□ -0.01
CLK3-222ENST00000568232 HOOK2Q96ED9 719 aa14.97□□□□□ -0.01
CLK3-222ENST00000568232 UBE2OQ9C0C9 1292 aaKnown RBP14.97□□□□□ -0.01
CLK3-222ENST00000568232 ZNF112Q9UJU3 913 aa14.97□□□□□ -0.01
CLK3-222ENST00000568232 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.01
CLK3-222ENST00000568232 IRF5Q13568 498 aa14.96□□□□□ -0.01
CLK3-222ENST00000568232 UBE4AQ14139 1066 aa14.96□□□□□ -0.01
CLK3-222ENST00000568232 CCDC57Q2TAC2 916 aa14.96□□□□□ -0.01
CLK3-222ENST00000568232 ZDHHC15Q96MV8 337 aa14.96□□□□□ -0.01
CLK3-222ENST00000568232 GUCD1Q96NT3 240 aa14.96□□□□□ -0.01
CLK3-222ENST00000568232 PUS3Q9BZE2 481 aaKnown RBP14.96□□□□□ -0.01
CLK3-222ENST00000568232 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLK3-222ENST00000568232 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
CLK3-222ENST00000568232 CAPN2P17655 700 aa14.95□□□□□ -0.02
CLK3-222ENST00000568232 FLIIQ13045 1269 aa14.95□□□□□ -0.02
CLK3-222ENST00000568232 FKBP5Q13451 457 aaPredicted RBP14.95□□□□□ -0.02
CLK3-222ENST00000568232 FKBP1CQ5VVH2 108 aa14.95□□□□□ -0.02
CLK3-222ENST00000568232 FAM161BQ96MY7 647 aa14.95□□□□□ -0.02
CLK3-222ENST00000568232 PRUNE2Q8WUY3 3088 aa14.95□□□□□ -0.02
CLK3-222ENST00000568232 RPTORQ8N122 1335 aa14.94□□□□□ -0.02
CLK3-222ENST00000568232 MYBBP1AQ9BQG0 1328 aaKnown RBP14.94□□□□□ -0.02
CLK3-222ENST00000568232 TCP10Q12799 353 aa14.94□□□□□ -0.02
CLK3-222ENST00000568232 FBXO33Q7Z6M2 555 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 243.9 ms