RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZC3H12CQ9C0D7 883 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 SEMA6BQ9H3T3 888 aa6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 SUGCTQ9HAC7 445 aa6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 TIAF1O95411 115 aa6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 PTPN11Q06124 597 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 ZMYM1Q5SVZ6 1142 aa6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 SMG8Q8ND04 991 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 RNF208Q9H0X6 261 aa6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 PCDHGC5Q9Y5F6 944 aa6.68□□□□□ -1.34
HERPUD1-212ENST00000567944 F6X3S4 739 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 LIG1P18858 919 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 GATA4P43694 442 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 LIG3P49916 1009 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 FANCCQ00597 558 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 MAP3K11Q16584 847 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 TSNAXIP1Q2TAA8 658 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 AGMOQ6ZNB7 445 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 GAL3ST3Q96A11 431 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 FAM46AQ96IP4 442 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 WDR18Q9BV38 432 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 COPRSQ9NQ92 184 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 KRT82Q9NSB4 513 aa6.67□□□□□ -1.34
HERPUD1-212ENST00000567944 AOC2O75106 756 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 DRD2P14416 443 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 TFE3P19532 575 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 PREPP48147 710 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 DOC2BQ14184 412 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 KIF4BQ2VIQ3 1234 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 MAP1SQ66K74 1059 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 ARMC10Q8N2F6 343 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 TMEM87AQ8NBN3 555 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 PHC3Q8NDX5 983 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 PPP1R9AQ9ULJ8 1098 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 CYP8B1Q9UNU6 501 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 TLR6Q9Y2C9 796 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 PCDHB5Q9Y5E4 795 aa6.66□□□□□ -1.34
HERPUD1-212ENST00000567944 GLB1P16278 677 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 ITGAEP38570 1179 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 RBM25P49756 843 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 RPS26P62854 115 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 NUTM2GQ5VZR2 741 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 LLGL2Q6P1M3 1020 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 METTL16Q86W50 562 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 C2CD4AQ8NCU7 369 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 GPBAR1Q8TDU6 330 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 KCNB2Q92953 911 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 RSRP1Q9BUV0 290 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 EMILIN2Q9BXX0 1053 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 CBX8Q9HC52 389 aa6.65□□□□□ -1.34
HERPUD1-212ENST00000567944 SYNGAP1Q96PV0 1343 aa6.65□□□□□ -1.35
HERPUD1-212ENST00000567944 TRIM37O94972 964 aa6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 ADH5P11766 374 aa6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 SOX4Q06945 474 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 ANKRD34AQ69YU3 496 aa6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 RHOVQ96L33 236 aa6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
HERPUD1-212ENST00000567944 TMPRSS2O15393 492 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 GARTP22102 1010 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 LRRC14Q15048 493 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 SCARA3Q6AZY7 606 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 C12orf50Q8NA57 414 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 TMEM74Q96NL1 305 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 METTL5Q9NRN9 209 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 KBTBD4Q9NVX7 518 aa6.63□□□□□ -1.35
HERPUD1-212ENST00000567944 SCAMP3O14828 347 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 ZNF76P36508 570 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 CDK8P49336 464 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 HDLBPQ00341 1268 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 SEPT6Q14141 434 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 AKAP4Q5JQC9 854 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 NKAPLQ5M9Q1 402 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 KRTAP9-9Q9BYP9 154 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 CRIM1Q9NZV1 1036 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 GGT7Q9UJ14 662 aa6.62□□□□□ -1.35
HERPUD1-212ENST00000567944 SCO2A0A1W2PP80 73 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 PF4P02776 101 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 RLBP1P12271 317 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 RING1Q06587 406 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 INPP5AQ14642 412 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 RSPO4Q2I0M5 234 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 HP1BP3Q5SSJ5 553 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 TP53INP1Q96A56 240 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 MYRFLQ96LU7 910 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 KCNQ5Q9NR82 932 aa6.61□□□□□ -1.35
HERPUD1-212ENST00000567944 DISC1Q9NRI5 854 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms