RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 USP40Q9NVE5 1235 aa8.85□□□□□ -0.99
SMPD3-210ENST00000567811 SAGE1Q9NXZ1 904 aa8.85□□□□□ -0.99
SMPD3-210ENST00000567811 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
SMPD3-210ENST00000567811 THSD7BQ9C0I4 1608 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 SREBF2Q12772 1141 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 TNNI3KQ59H18 835 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.84□□□□□ -0.99
SMPD3-210ENST00000567811 SPATA5Q8NB90 893 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 CLMNQ96JQ2 1002 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 HMG20BQ9P0W2 317 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 DDX19BQ9UMR2 479 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 MYO5AQ9Y4I1 1855 aaKnown RBP8.84□□□□□ -0.99
SMPD3-210ENST00000567811 FPGT-TNNI3KV9GXZ4 949 aa8.84□□□□□ -0.99
SMPD3-210ENST00000567811 MANSC4A6NHS7 340 aaPredicted RBP8.83□□□□□ -1
SMPD3-210ENST00000567811 CAPN15O75808 1086 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 TBC1D8O95759 1140 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 ZBTB48P10074 688 aaPredicted RBP8.83□□□□□ -1
SMPD3-210ENST00000567811 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
SMPD3-210ENST00000567811 TCP10Q12799 353 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 PDE3AQ14432 1141 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 CEP85Q6P2H3 762 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.83□□□□□ -1
SMPD3-210ENST00000567811 TBC1D9Q6ZT07 1266 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 DZIP1Q86YF9 867 aaKnown RBP8.83□□□□□ -1
SMPD3-210ENST00000567811 WNK4Q96J92 1243 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 CCDC8Q9H0W5 538 aaPredicted RBP8.83□□□□□ -1
SMPD3-210ENST00000567811 ZBTB40Q9NUA8 1239 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 LRP2BPQ9P2M1 347 aa8.83□□□□□ -1
SMPD3-210ENST00000567811 GPR75-ASB3A0A0A6YYF3 556 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 ALDH1A1P00352 501 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 MCAMP43121 646 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 GSTO1P78417 241 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 MECOMQ03112 1051 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 DCAF15Q66K64 600 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 OTUD7BQ6GQQ9 843 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 MIGA2Q7L4E1 593 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 ERC1Q8IUD2 1116 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 EAF2Q96CJ1 260 aaPredicted RBP8.82□□□□□ -1
SMPD3-210ENST00000567811 ZNF512BQ96KM6 892 aaPredicted RBP8.82□□□□□ -1
SMPD3-210ENST00000567811 DBNDD2Q9BQY9 259 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 ELP3Q9H9T3 547 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 SNRKQ9NRH2 765 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 RAI14Q9P0K7 980 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 CSADQ9Y600 493 aa8.82□□□□□ -1
SMPD3-210ENST00000567811 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
SMPD3-210ENST00000567811 HMMRO75330 724 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 ENTPD3O75355 529 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 MAP4K4O95819 1239 aaPredicted RBP8.81□□□□□ -1
SMPD3-210ENST00000567811 NFIAQ12857 509 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 DGKZQ13574 1117 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 IFNL1Q8IU54 200 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 ZFPM1Q8IX07 1006 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.81□□□□□ -1
SMPD3-210ENST00000567811 ZKSCAN4Q969J2 545 aaPredicted RBP8.81□□□□□ -1
SMPD3-210ENST00000567811 NSUN4Q96CB9 384 aaKnown RBP8.81□□□□□ -1
SMPD3-210ENST00000567811 OPTNQ96CV9 577 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 IDI2Q9BXS1 227 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 ZNF341Q9BYN7 854 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 FAM198AQ9UFP1 575 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 EXOC6BQ9Y2D4 811 aa8.81□□□□□ -1
SMPD3-210ENST00000567811 GAKO14976 1311 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 GPR25O00155 361 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 IGSF3O75054 1194 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 RAB11FIP3O75154 756 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 GJA5P36382 358 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 BTDP43251 543 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 RGS3P49796 1198 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 GTF2A2P52657 109 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 VGLL4Q14135 290 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 NOM1Q5C9Z4 860 aaKnown RBP8.8□□□□□ -1
SMPD3-210ENST00000567811 PI16Q6UXB8 463 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 ERO1BQ86YB8 467 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 ZSCAN29Q8IWY8 852 aaPredicted RBP8.8□□□□□ -1
SMPD3-210ENST00000567811 SIRT2Q8IXJ6 389 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 RHPN1Q8TCX5 695 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 ABHD8Q96I13 439 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 MS4A4AQ96JQ5 239 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 NOL10Q9BSC4 688 aaKnown RBP8.8□□□□□ -1
SMPD3-210ENST00000567811 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 MCOLN1Q9GZU1 580 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 ZNF112Q9UJU3 913 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 SSC5DA1L4H1 1573 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 MROH7-TTC4A0A0A0MT08 1334 aa8.8□□□□□ -1
SMPD3-210ENST00000567811 FKTNO75072 461 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 NPM3O75607 178 aaKnown RBP8.79□□□□□ -1
SMPD3-210ENST00000567811 BAG3O95817 575 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 CYP2E1P05181 493 aaPredicted RBP8.79□□□□□ -1
SMPD3-210ENST00000567811 ZAP70P43403 619 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 PPP4CP60510 307 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 MAP3K10Q02779 954 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 C20orf194Q5TEA3 1177 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 NAA16Q6N069 864 aaPredicted RBP8.79□□□□□ -1
SMPD3-210ENST00000567811 AACSQ86V21 672 aa8.79□□□□□ -1
SMPD3-210ENST00000567811 CLASRPQ8N2M8 674 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms