RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 MFSD14BQ5SR56 506 aa17.67■□□□□ 0.42
SMG1-213ENST00000567737 IFNLR1Q8IU57 520 aaPredicted RBP17.67■□□□□ 0.42
SMG1-213ENST00000567737 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
SMG1-213ENST00000567737 PXYLP1Q8TE99 480 aa17.67■□□□□ 0.42
SMG1-213ENST00000567737 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
SMG1-213ENST00000567737 PAK6Q9NQU5 681 aaPredicted RBP17.67■□□□□ 0.42
SMG1-213ENST00000567737 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
SMG1-213ENST00000567737 ELNP15502 786 aa17.66■□□□□ 0.42
SMG1-213ENST00000567737 CRKP46108 304 aa17.66■□□□□ 0.42
SMG1-213ENST00000567737 DIS3LQ8TF46 1054 aaKnown RBP17.66■□□□□ 0.42
SMG1-213ENST00000567737 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
SMG1-213ENST00000567737 FAM205AQ6ZU69 1335 aa17.66■□□□□ 0.42
SMG1-213ENST00000567737 H7C1W4 665 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
SMG1-213ENST00000567737 BCRP11274 1271 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 FLT3LGP49771 235 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 CWF19L2Q2TBE0 894 aaKnown RBP17.65■□□□□ 0.42
SMG1-213ENST00000567737 DCAF15Q66K64 600 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 CCDC146Q8IYE0 955 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 PLA2G12BQ9BX93 195 aa17.65■□□□□ 0.42
SMG1-213ENST00000567737 ANKRD18BA2A2Z9 1011 aa17.64■□□□□ 0.41
SMG1-213ENST00000567737 PI4KAP2A4QPH2 592 aa17.64■□□□□ 0.41
SMG1-213ENST00000567737 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
SMG1-213ENST00000567737 PI4KAP1Q8N8J0 262 aa17.64■□□□□ 0.41
SMG1-213ENST00000567737 ANKLE1Q8NAG6 615 aa17.64■□□□□ 0.41
SMG1-213ENST00000567737 ALPK3Q96L96 1907 aa17.64■□□□□ 0.41
SMG1-213ENST00000567737 IRF5Q13568 498 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 CHMP4AQ9BY43 222 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 ZNF341Q9BYN7 854 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 NBPF3Q9H094 633 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 TMOD2Q9NZR1 351 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 KCNH4Q9UQ05 1017 aa17.63■□□□□ 0.41
SMG1-213ENST00000567737 TNPO2O14787 897 aaKnown RBP17.62■□□□□ 0.41
SMG1-213ENST00000567737 CSF1RP07333 972 aa17.62■□□□□ 0.41
SMG1-213ENST00000567737 CYP2C8P10632 490 aa17.62■□□□□ 0.41
SMG1-213ENST00000567737 CACNB3P54284 484 aa17.62■□□□□ 0.41
SMG1-213ENST00000567737 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
SMG1-213ENST00000567737 FAM109BQ6ICB4 259 aaPredicted RBP17.62■□□□□ 0.41
SMG1-213ENST00000567737 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMG1-213ENST00000567737 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
SMG1-213ENST00000567737 COL9A1P20849 921 aa17.61■□□□□ 0.41
SMG1-213ENST00000567737 FAM83AQ86UY5 434 aa17.61■□□□□ 0.41
SMG1-213ENST00000567737 FAM161BQ96MY7 647 aa17.61■□□□□ 0.41
SMG1-213ENST00000567737 POTEB2H3BUK9 544 aa17.6■□□□□ 0.41
SMG1-213ENST00000567737 INPP5BP32019 993 aa17.6■□□□□ 0.41
SMG1-213ENST00000567737 TDRD7Q8NHU6 1098 aaKnown RBP17.6■□□□□ 0.41
SMG1-213ENST00000567737 C11orf49Q9H6J7 331 aa17.6■□□□□ 0.41
SMG1-213ENST00000567737 MGAMO43451 1857 aa17.59■□□□□ 0.41
SMG1-213ENST00000567737 PLIN1O60240 522 aa17.59■□□□□ 0.41
SMG1-213ENST00000567737 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
SMG1-213ENST00000567737 MOGSQ13724 837 aa17.59■□□□□ 0.41
SMG1-213ENST00000567737 MIGA2Q7L4E1 593 aa17.59■□□□□ 0.41
SMG1-213ENST00000567737 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
SMG1-213ENST00000567737 VCANP13611 3396 aa17.58■□□□□ 0.41
SMG1-213ENST00000567737 ZNF697Q5TEC3 545 aa17.58■□□□□ 0.4
SMG1-213ENST00000567737 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
SMG1-213ENST00000567737 TEKT1Q969V4 418 aa17.58■□□□□ 0.4
SMG1-213ENST00000567737 COA7Q96BR5 231 aa17.58■□□□□ 0.4
SMG1-213ENST00000567737 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
SMG1-213ENST00000567737 HIBADHP31937 336 aaKnown RBP17.57■□□□□ 0.4
SMG1-213ENST00000567737 HDLBPQ00341 1268 aaKnown RBP17.57■□□□□ 0.4
SMG1-213ENST00000567737 GCKRQ14397 625 aa17.57■□□□□ 0.4
SMG1-213ENST00000567737 GPAT2Q6NUI2 795 aa17.57■□□□□ 0.4
SMG1-213ENST00000567737 CHMP3Q9Y3E7 222 aa17.57■□□□□ 0.4
SMG1-213ENST00000567737 ZNF853P0CG23 659 aa17.56■□□□□ 0.4
SMG1-213ENST00000567737 CASP7P55210 303 aa17.56■□□□□ 0.4
SMG1-213ENST00000567737 FKBP1CQ5VVH2 108 aa17.56■□□□□ 0.4
SMG1-213ENST00000567737 FASTKD5Q7L8L6 764 aaKnown RBP17.56■□□□□ 0.4
SMG1-213ENST00000567737 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
SMG1-213ENST00000567737 IFT57Q9NWB7 429 aa17.56■□□□□ 0.4
SMG1-213ENST00000567737 CXCL11O14625 94 aa17.55■□□□□ 0.4
SMG1-213ENST00000567737 GYG1P46976 350 aa17.55■□□□□ 0.4
SMG1-213ENST00000567737 GNAI1P63096 354 aa17.55■□□□□ 0.4
SMG1-213ENST00000567737 C8orf58Q8NAV2 365 aa17.55■□□□□ 0.4
SMG1-213ENST00000567737 MAFAQ8NHW3 353 aaPredicted RBP17.55■□□□□ 0.4
SMG1-213ENST00000567737 SMCR8Q8TEV9 937 aaPredicted RBP17.55■□□□□ 0.4
SMG1-213ENST00000567737 HMX1Q9NP08 348 aaPredicted RBP17.55■□□□□ 0.4
SMG1-213ENST00000567737 A0A1B0GUL6 1792 aa17.55■□□□□ 0.4
SMG1-213ENST00000567737 HMGCRP04035 888 aa17.54■□□□□ 0.4
SMG1-213ENST00000567737 MDM2Q00987 491 aaPredicted RBP17.54■□□□□ 0.4
SMG1-213ENST00000567737 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
SMG1-213ENST00000567737 NOL9Q5SY16 702 aaKnown RBP17.54■□□□□ 0.4
SMG1-213ENST00000567737 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
SMG1-213ENST00000567737 ZDHHC15Q96MV8 337 aa17.54■□□□□ 0.4
SMG1-213ENST00000567737 STK31Q9BXU1 1019 aa17.54■□□□□ 0.4
SMG1-213ENST00000567737 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
SMG1-213ENST00000567737 ZNF112Q9UJU3 913 aa17.54■□□□□ 0.4
SMG1-213ENST00000567737 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
SMG1-213ENST00000567737 GRIK5Q16478 980 aa17.53■□□□□ 0.4
SMG1-213ENST00000567737 TBC1D22AQ8WUA7 517 aa17.53■□□□□ 0.4
SMG1-213ENST00000567737 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
SMG1-213ENST00000567737 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.4
SMG1-213ENST00000567737 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
SMG1-213ENST00000567737 CHAF1AQ13111 956 aaPredicted RBP17.52■□□□□ 0.4
SMG1-213ENST00000567737 GADL1Q6ZQY3 521 aa17.52■□□□□ 0.4
SMG1-213ENST00000567737 FAM84BQ96KN1 310 aaPredicted RBP17.52■□□□□ 0.4
SMG1-213ENST00000567737 CDX2Q99626 313 aaPredicted RBP17.52■□□□□ 0.4
SMG1-213ENST00000567737 OGDHLQ9ULD0 1010 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms