RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SALL1Q9NSC2 1324 aa27.29■■□□□ 1.96
LINC00543-201ENST00000567234 DHX16O60231 1041 aaKnown RBP27.29■■□□□ 1.96
LINC00543-201ENST00000567234 DTNBO60941 627 aa27.29■■□□□ 1.96
LINC00543-201ENST00000567234 CTDNEP1O95476 244 aa27.29■■□□□ 1.96
LINC00543-201ENST00000567234 DNM1Q05193 864 aaKnown RBP27.29■■□□□ 1.96
LINC00543-201ENST00000567234 GRAPQ13588 217 aa27.29■■□□□ 1.96
LINC00543-201ENST00000567234 GRAPLQ8TC17 118 aaPredicted RBP27.29■■□□□ 1.96
LINC00543-201ENST00000567234 QSER1Q2KHR3 1735 aa27.29■■□□□ 1.96
LINC00543-201ENST00000567234 CYP7A1P22680 504 aa27.28■■□□□ 1.96
LINC00543-201ENST00000567234 IQSEC3Q9UPP2 1182 aaPredicted RBP27.28■■□□□ 1.96
LINC00543-201ENST00000567234 PTPDC1A2A3K4 754 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 WTIPA6NIX2 430 aaPredicted RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 IGSF3O75054 1194 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 HIBADHP31937 336 aaKnown RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 KRT85P78386 507 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 MSL1Q68DK7 614 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 NAA16Q6N069 864 aaPredicted RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 SMAP1Q8IYB5 467 aaPredicted RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 LCORLQ8N3X6 602 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 FLAD1Q8NFF5 587 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 TMEM87BQ96K49 555 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 ZSCAN16Q9H4T2 348 aaPredicted RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 CNNM2Q9H8M5 875 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 ABCF2Q9UG63 623 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 GADD45BO75293 160 aaPredicted RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 PRR5LQ6MZQ0 368 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 PDGFDQ9GZP0 370 aaPredicted RBP27.27■■□□□ 1.96
LINC00543-201ENST00000567234 RAI14Q9P0K7 980 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 SLC4A4Q9Y6R1 1079 aa27.27■■□□□ 1.96
LINC00543-201ENST00000567234 CCT2P78371 535 aaKnown RBP27.26■■□□□ 1.95
LINC00543-201ENST00000567234 RBM27Q9P2N5 1060 aaKnown RBP27.26■■□□□ 1.95
LINC00543-201ENST00000567234 ANGEL1Q9UNK9 670 aaKnown RBP27.26■■□□□ 1.95
LINC00543-201ENST00000567234 ELP1O95163 1332 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 H3BQV1 296 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 SERPINB2P05120 415 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 IFFO2Q5TF58 517 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 LEMD3Q9Y2U8 911 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 CCDC88AQ3V6T2 1871 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 IRS2Q9Y4H2 1338 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 POLRMTO00411 1230 aaKnown RBP27.25■■□□□ 1.95
LINC00543-201ENST00000567234 FIBPO43427 364 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 CCDC125Q86Z20 511 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 KLHL34Q8N239 644 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 DDX11Q96FC9 970 aa27.25■■□□□ 1.95
LINC00543-201ENST00000567234 NAP1L2Q9ULW6 460 aaPredicted RBP27.25■■□□□ 1.95
LINC00543-201ENST00000567234 MAGEB6P1A0A0J9YX57 407 aa27.24■■□□□ 1.95
LINC00543-201ENST00000567234 KLF18A0A0U1RQI7 1052 aa27.24■■□□□ 1.95
LINC00543-201ENST00000567234 ST5P78524 1137 aa27.24■■□□□ 1.95
LINC00543-201ENST00000567234 CRY2Q49AN0 593 aa27.24■■□□□ 1.95
LINC00543-201ENST00000567234 KRT23Q9C075 422 aa27.24■■□□□ 1.95
LINC00543-201ENST00000567234 GPHNQ9NQX3 736 aaPredicted RBP27.24■■□□□ 1.95
LINC00543-201ENST00000567234 MAST2Q6P0Q8 1798 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 AKNAD1Q5T1N1 836 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 STAG1Q8WVM7 1258 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 SCAND2PQ9GZW5 306 aaPredicted RBP27.23■■□□□ 1.95
LINC00543-201ENST00000567234 NCOA5Q9HCD5 579 aaKnown RBP27.23■■□□□ 1.95
LINC00543-201ENST00000567234 HPS5Q9UPZ3 1129 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 MYH15Q9Y2K3 1946 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 SH2B2O14492 632 aaPredicted RBP27.23■■□□□ 1.95
LINC00543-201ENST00000567234 TDO2P48775 406 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 CYB5R4Q7L1T6 521 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 FERMT3Q86UX7 667 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 RGS22Q8NE09 1264 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 MTA3Q9BTC8 594 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 ZKSCAN5Q9Y2L8 839 aa27.23■■□□□ 1.95
LINC00543-201ENST00000567234 PRKAB2O43741 272 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 KLRK1P26718 216 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 RESTQ13127 1097 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 LRSAM1Q6UWE0 723 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 NLGN1Q8N2Q7 840 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 MIGA1Q8NAN2 632 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 RIOK1Q9BRS2 568 aaKnown RBP27.22■■□□□ 1.95
LINC00543-201ENST00000567234 CCDC39Q9UFE4 941 aa27.22■■□□□ 1.95
LINC00543-201ENST00000567234 NEDD4P46934 1319 aa27.21■■□□□ 1.95
LINC00543-201ENST00000567234 GOLGA8BA8MQT2 603 aa27.21■■□□□ 1.95
LINC00543-201ENST00000567234 B4E1Z4 1266 aa27.21■■□□□ 1.95
LINC00543-201ENST00000567234 C15orf52Q6ZUT6 534 aaKnown RBP27.21■■□□□ 1.95
LINC00543-201ENST00000567234 ADGRA1Q86SQ6 560 aa27.21■■□□□ 1.95
LINC00543-201ENST00000567234 RNF41Q9H4P4 317 aaPredicted RBP27.21■■□□□ 1.95
LINC00543-201ENST00000567234 KIAA1551Q9HCM1 1747 aa27.21■■□□□ 1.95
LINC00543-201ENST00000567234 XDHP47989 1333 aa27.21■■□□□ 1.95
LINC00543-201ENST00000567234 MFSD6Q6ZSS7 791 aa27.2■■□□□ 1.95
LINC00543-201ENST00000567234 SGMS1Q86VZ5 419 aa27.2■■□□□ 1.95
LINC00543-201ENST00000567234 RPGRQ92834 1020 aaKnown RBP27.2■■□□□ 1.95
LINC00543-201ENST00000567234 ANAPC4Q9UJX5 808 aa27.2■■□□□ 1.95
LINC00543-201ENST00000567234 LIFRP42702 1097 aa27.2■■□□□ 1.94
LINC00543-201ENST00000567234 GIMAP6Q6P9H5 292 aa27.2■■□□□ 1.94
LINC00543-201ENST00000567234 IGDCC4Q8TDY8 1250 aa27.2■■□□□ 1.94
LINC00543-201ENST00000567234 UPF1Q92900 1129 aaKnown RBP eCLIP27.2■■□□□ 1.94
LINC00543-201ENST00000567234 NRXN2Q9P2S2 1712 aa27.19■■□□□ 1.94
LINC00543-201ENST00000567234 MMP10P09238 476 aa27.19■■□□□ 1.94
LINC00543-201ENST00000567234 NSUN4Q96CB9 384 aaKnown RBP27.19■■□□□ 1.94
LINC00543-201ENST00000567234 BRIP1Q9BX63 1249 aa27.18■■□□□ 1.94
LINC00543-201ENST00000567234 ANKIB1Q9P2G1 1089 aa27.18■■□□□ 1.94
LINC00543-201ENST00000567234 ANKRD31Q8N7Z5 1873 aa27.18■■□□□ 1.94
LINC00543-201ENST00000567234 LETM1O95202 739 aaPredicted RBP27.18■■□□□ 1.94
LINC00543-201ENST00000567234 CTDSPL2Q05D32 466 aa27.18■■□□□ 1.94
LINC00543-201ENST00000567234 SPTY2D1Q68D10 685 aaPredicted RBP27.18■■□□□ 1.94
LINC00543-201ENST00000567234 SASS6Q6UVJ0 657 aa27.18■■□□□ 1.94
LINC00543-201ENST00000567234 RBM17Q96I25 401 aaKnown RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms